RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 LANCL3Q6ZV70 420 aa8.21□□□□□ -1.1
HDAC3-205ENST00000469550 ZNF695Q8IW36 515 aa8.21□□□□□ -1.1
HDAC3-205ENST00000469550 SELENOHQ8IZQ5 122 aaKnown RBP8.21□□□□□ -1.1
HDAC3-205ENST00000469550 NFAM1Q8NET5 270 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-205ENST00000469550 MBD3L1Q8WWY6 194 aa8.21□□□□□ -1.1
HDAC3-205ENST00000469550 SPTSSAQ969W0 71 aa8.21□□□□□ -1.1
HDAC3-205ENST00000469550 ATP5SQ99766 215 aa8.21□□□□□ -1.1
HDAC3-205ENST00000469550 TGIF2Q9GZN2 237 aa8.21□□□□□ -1.1
HDAC3-205ENST00000469550 SRD5A3Q9H8P0 318 aa8.21□□□□□ -1.1
HDAC3-205ENST00000469550 CALHM2Q9HA72 323 aa8.21□□□□□ -1.1
HDAC3-205ENST00000469550 SDF2L1Q9HCN8 221 aa8.21□□□□□ -1.1
HDAC3-205ENST00000469550 PIGBOS1A0A0B4J2F0 54 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 ZNF814B7Z6K7 855 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 SHISA8B8ZZ34 492 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 M0R135 149 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 PGA5P0DJD9 388 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 GZMBP10144 247 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 VDAC1P21796 283 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 NMSQ5H8A3 153 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 C16orf47Q6ZP98 133 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-205ENST00000469550 LHFPL2Q6ZUX7 228 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 PRSS58Q8IYP2 241 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 OSR2Q8N2R0 312 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 OR10A7Q8NGE5 316 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 IL22RA2Q969J5 263 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 TMEM54Q969K7 222 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 MISP3Q96FF7 219 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 ZNF799Q96GE5 643 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 THOC3Q96J01 351 aaKnown RBP8.2□□□□□ -1.1
HDAC3-205ENST00000469550 SIGLEC12Q96PQ1 595 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 PRO1933Q9H354 126 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 RNF150Q9ULK6 438 aa8.2□□□□□ -1.1
HDAC3-205ENST00000469550 UBE2J1Q9Y385 318 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-205ENST00000469550 EXPH5Q8NEV8 1989 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 SSSCA1O60232 199 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 PDCD6O75340 191 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 GLI4P10075 376 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 BCL2P10415 239 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 COX6A1P12074 109 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 FUT3P21217 361 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 EPHA1P21709 976 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 OMGP23515 440 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 GNRHRP30968 328 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 PTGDSP41222 190 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 TDGF1P3P51864 188 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 TMEM42Q69YG0 159 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 FAM180AQ6UWF9 173 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 MEX3BQ6ZN04 569 aaKnown RBP8.19□□□□□ -1.1
HDAC3-205ENST00000469550 TGIF2LYQ8IUE0 185 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 PSMF1Q92530 271 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 NABP1Q96AH0 204 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 CABLES2Q9BTV7 478 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 GPR173Q9NS66 373 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 KLRF1Q9NZS2 232 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 ARID1AO14497 2285 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 PRRC2CQ9Y520 2896 aaKnown RBP8.19□□□□□ -1.1
HDAC3-205ENST00000469550 ZGRF1Q86YA3 2104 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 IGKV1-27A0A075B6S5 117 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 LOC102723996A0A087X1L8 192 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 A0A1W2PNR3 127 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 ANGPTL7O43827 346 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 ZNF205O95201 554 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 TMEM50AO95807 157 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 AMBPP02760 352 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 SERPINA7P05543 415 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 CYC1P08574 325 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 UCP1P25874 307 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 PDLIM4P50479 330 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 CLDN17P56750 224 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 RAB11AP62491 216 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 MALLQ13021 153 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 HNF4GQ14541 408 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 RNPS1Q15287 305 aaKnown RBP8.19□□□□□ -1.1
HDAC3-205ENST00000469550 CXorf66Q5JRM2 361 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-205ENST00000469550 SLC25A26Q70HW3 274 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 CPEB2Q7Z5Q1 589 aaKnown RBP8.19□□□□□ -1.1
HDAC3-205ENST00000469550 TBC1D26Q86UD7 250 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 OR2M3Q8NG83 312 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 OR4X1Q8NH49 305 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 OR2V1Q8NHB1 315 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 PLPPR1Q8TBJ4 325 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 CA5BP1Q8WTZ4 195 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 ACY3Q96HD9 319 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 AGMATQ9BSE5 352 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 PSMG3Q9BT73 122 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-205ENST00000469550 VAX2Q9UIW0 290 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 ZNF391Q9UJN7 358 aa8.19□□□□□ -1.1
HDAC3-205ENST00000469550 TRAV17A0A0B4J275 112 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 TCAPO15273 167 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 ADAM20O43506 726 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 SPRY1O43609 319 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-205ENST00000469550 CST7O76096 145 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 IFNA5P01569 189 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 SLC25A6P12236 298 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 CRYGSP22914 178 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 TNFSF10P50591 281 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 NUTF2P61970 127 aaKnown RBP8.18□□□□□ -1.1
HDAC3-205ENST00000469550 RUNX1Q01196 453 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 SHISA6Q6ZSJ9 500 aa8.18□□□□□ -1.1
HDAC3-205ENST00000469550 ANKRD37Q7Z713 158 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms