RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 ENTHD1Q8IYW4 607 aa3.95□□□□□ -1.78
PTPN4-209ENST00000469511 ZNF679Q8IYX0 411 aa3.95□□□□□ -1.78
PTPN4-209ENST00000469511 YIPF7Q8N8F6 280 aa3.95□□□□□ -1.78
PTPN4-209ENST00000469511 OR10AC1Q8NH08 325 aa3.95□□□□□ -1.78
PTPN4-209ENST00000469511 RP9Q8TA86 221 aaKnown RBP3.95□□□□□ -1.78
PTPN4-209ENST00000469511 DYDC1Q8WWB3 177 aa3.95□□□□□ -1.78
PTPN4-209ENST00000469511 MUL1Q969V5 352 aa3.95□□□□□ -1.78
PTPN4-209ENST00000469511 BORCS8Q96FH0 119 aa3.95□□□□□ -1.78
PTPN4-209ENST00000469511 MBOAT4Q96T53 435 aa3.95□□□□□ -1.78
PTPN4-209ENST00000469511 NEURL2Q9BR09 285 aa3.95□□□□□ -1.78
PTPN4-209ENST00000469511 MROQ9BYG7 248 aa3.95□□□□□ -1.78
PTPN4-209ENST00000469511 PARP12Q9H0J9 701 aaKnown RBP3.95□□□□□ -1.78
PTPN4-209ENST00000469511 SRD5A3Q9H8P0 318 aa3.95□□□□□ -1.78
PTPN4-209ENST00000469511 LINC00574Q9H8X3 128 aa3.95□□□□□ -1.78
PTPN4-209ENST00000469511 GORASP2Q9H8Y8 452 aa3.95□□□□□ -1.78
PTPN4-209ENST00000469511 IL1RAPQ9NPH3 570 aa3.95□□□□□ -1.78
PTPN4-209ENST00000469511 ABCD2Q9UBJ2 740 aa3.95□□□□□ -1.78
PTPN4-209ENST00000469511 IKZF2Q9UKS7 526 aa3.95□□□□□ -1.78
PTPN4-209ENST00000469511 SAMD4AQ9UPU9 718 aaKnown RBP3.95□□□□□ -1.78
PTPN4-209ENST00000469511 BAIAP2Q9UQB8 552 aa3.95□□□□□ -1.78
PTPN4-209ENST00000469511 NUBP2Q9Y5Y2 271 aa3.95□□□□□ -1.78
PTPN4-209ENST00000469511 C15orf65H3BRN8 121 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 DEGS1O15121 323 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 RGS10O43665 173 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 RBMXL2O75526 392 aaKnown RBP3.94□□□□□ -1.78
PTPN4-209ENST00000469511 KDM4BO94953 1096 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 OR5H8P0DN80 308 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 ATP1B3P54709 279 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 MTCP1P56278 107 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 TPPP2P59282 170 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 ACTBP60709 375 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 CXCR4P61073 352 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 RAB40BQ12829 278 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 MMDQ15546 238 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 MAPRE2Q15555 327 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 CT45A1Q5HYN5 189 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 BCL2L15Q5TBC7 163 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 DEGS2Q6QHC5 323 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 ARPINQ7Z6K5 226 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 LYG2Q86SG7 212 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 CROCCP2Q86T23 111 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 CCDC28AQ8IWP9 274 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 HS3ST5Q8IZT8 346 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 PRSS35Q8N3Z0 413 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 LINC00311Q8N616 119 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 ZNF439Q8NDP4 499 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 OR51T1Q8NGJ9 327 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 OR9G4Q8NGQ1 327 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 CT45A3Q8NHU0 189 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 PHLDA1Q8WV24 401 aaPredicted RBP3.94□□□□□ -1.78
PTPN4-209ENST00000469511 CCDC107Q8WV48 283 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 RGP1Q92546 391 aaPredicted RBP3.94□□□□□ -1.78
PTPN4-209ENST00000469511 TMEM106AQ96A25 262 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 FLYWCH2Q96CP2 140 aaKnown RBP3.94□□□□□ -1.78
PTPN4-209ENST00000469511 NR1H4Q96RI1 486 aaPredicted RBP3.94□□□□□ -1.78
PTPN4-209ENST00000469511 HOPXQ9BPY8 73 aaPredicted RBP3.94□□□□□ -1.78
PTPN4-209ENST00000469511 ELOVL1Q9BW60 279 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 DGCR6LQ9BY27 220 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 YIPF3Q9GZM5 350 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 CHST5Q9GZS9 411 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 GLS2Q9UI32 602 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 MRPS28Q9Y2Q9 187 aaKnown RBP3.94□□□□□ -1.78
PTPN4-209ENST00000469511 R4GMQ9 66 aa3.94□□□□□ -1.78
PTPN4-209ENST00000469511 FUOMA2VDF0 154 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 ZAR1LA6NP61 321 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 OR11H12B2RN74 326 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 H0Y980 276 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 H0YJX3 145 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 H3BN98 237 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 ARPC2O15144 300 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 RTL8CO15255 209 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 XRCC3O43542 346 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 SYT7O43581 403 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 ZNF254O75437 659 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 CNIH1O95406 144 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 HLA-DRB1P01911 266 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 ATF1P18846 271 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 C21orf33P30042 268 aaPredicted RBP3.93□□□□□ -1.78
PTPN4-209ENST00000469511 RBP2P50120 134 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 CX3CL1P78423 397 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 CDK5Q00535 292 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 ZSCAN26Q16670 478 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 MICAQ29983 383 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 C5orf64Q2M2E5 130 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 ZNF829Q3KNS6 432 aaPredicted RBP3.93□□□□□ -1.78
PTPN4-209ENST00000469511 C4orf46Q504U0 113 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 PAN3Q58A45 887 aaKnown RBP3.93□□□□□ -1.78
PTPN4-209ENST00000469511 LIN54Q6MZP7 749 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 ZNF322Q6U7Q0 402 aaPredicted RBP3.93□□□□□ -1.78
PTPN4-209ENST00000469511 SLC25A48Q6ZT89 311 aaKnown RBP3.93□□□□□ -1.78
PTPN4-209ENST00000469511 GTSCR1Q86UQ5 136 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 ODF3L1Q8IXM7 274 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 Q8IYB0 196 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 PGAM4Q8N0Y7 254 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 OR10V1Q8NGI7 309 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 OR10K1Q8NGX5 313 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 TEX47Q8TBZ9 253 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 FGGYQ96C11 551 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 ATP6V1G3Q96LB4 118 aa3.93□□□□□ -1.78
PTPN4-209ENST00000469511 FEVQ99581 238 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 791.1 ms