RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 TMEM50BP56557 158 aa12.24□□□□□ -0.45
DDX56-208ENST00000467318 BAMBIQ13145 260 aa12.24□□□□□ -0.45
DDX56-208ENST00000467318 AANATQ16613 207 aa12.24□□□□□ -0.45
DDX56-208ENST00000467318 SCGB2B2Q4G0G5 96 aa12.24□□□□□ -0.45
DDX56-208ENST00000467318 TOR2AQ5JU69 321 aa12.24□□□□□ -0.45
DDX56-208ENST00000467318 WDR25Q64LD2 544 aaPredicted RBP12.24□□□□□ -0.45
DDX56-208ENST00000467318 DUX4L9Q6RFH8 374 aaPredicted RBP12.24□□□□□ -0.45
DDX56-208ENST00000467318 GSG1LQ6UXU4 331 aa12.24□□□□□ -0.45
DDX56-208ENST00000467318 TMED4Q7Z7H5 227 aa12.24□□□□□ -0.45
DDX56-208ENST00000467318 LYG2Q86SG7 212 aa12.24□□□□□ -0.45
DDX56-208ENST00000467318 OR5M8Q8NGP6 311 aa12.24□□□□□ -0.45
DDX56-208ENST00000467318 ARL6Q9H0F7 186 aa12.24□□□□□ -0.45
DDX56-208ENST00000467318 FXYD6Q9H0Q3 95 aa12.24□□□□□ -0.45
DDX56-208ENST00000467318 AKAP9Q99996 3911 aa12.24□□□□□ -0.45
DDX56-208ENST00000467318 FOXI3A8MTJ6 420 aaPredicted RBP12.23□□□□□ -0.45
DDX56-208ENST00000467318 I3L521 148 aa12.23□□□□□ -0.45
DDX56-208ENST00000467318 SELLP14151 372 aa12.23□□□□□ -0.45
DDX56-208ENST00000467318 NAT1P18440 290 aa12.23□□□□□ -0.45
DDX56-208ENST00000467318 OR3A1P47881 315 aa12.23□□□□□ -0.45
DDX56-208ENST00000467318 PAX5Q02548 391 aa12.23□□□□□ -0.45
DDX56-208ENST00000467318 C2orf68Q2NKX9 166 aa12.23□□□□□ -0.45
DDX56-208ENST00000467318 OR13C8Q8NGS7 320 aa12.23□□□□□ -0.45
DDX56-208ENST00000467318 SUN5Q8TC36 379 aa12.23□□□□□ -0.45
DDX56-208ENST00000467318 LRRC20Q8TCA0 184 aa12.23□□□□□ -0.45
DDX56-208ENST00000467318 RAB3CQ96E17 227 aa12.23□□□□□ -0.45
DDX56-208ENST00000467318 MFFQ9GZY8 342 aa12.23□□□□□ -0.45
DDX56-208ENST00000467318 PPA2Q9H2U2 334 aa12.23□□□□□ -0.45
DDX56-208ENST00000467318 ZNF581Q9P0T4 197 aa12.23□□□□□ -0.45
DDX56-208ENST00000467318 PFDN2Q9UHV9 154 aa12.23□□□□□ -0.45
DDX56-208ENST00000467318 DOCK11Q5JSL3 2073 aa12.23□□□□□ -0.45
DDX56-208ENST00000467318 OTOGQ6ZRI0 2925 aa12.23□□□□□ -0.45
DDX56-208ENST00000467318 A8MXK9 166 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 HSPB6O14558 160 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 CA11O75493 328 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 FOXH1O75593 365 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 OR2F2O95006 317 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 FCER2P06734 321 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 NDUFB7P17568 137 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 UBA52P62987 128 aaKnown RBP12.22□□□□□ -0.45
DDX56-208ENST00000467318 DHRS2Q13268 280 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 OR2F1Q13607 317 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 NKAPLQ5M9Q1 402 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 SPNS3Q6ZMD2 512 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 C6orf201Q7Z4U5 140 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 OR4S1Q8NGB4 309 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 NEK7Q8TDX7 302 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 ST8SIA4Q92187 359 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 PHB2Q99623 299 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 RDH8Q9NYR8 311 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 ANAPC10Q9UM13 185 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 MALRD1Q5VYJ5 2156 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 ZNF469Q96JG9 3925 aaPredicted RBP12.22□□□□□ -0.45
DDX56-208ENST00000467318 SERPINE3A8MV23 424 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 ZBTB25P24278 435 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 IL2RGP31785 369 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 PLAC9Q5JTB6 97 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 ZNF546Q86UE3 836 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 ARRDC1Q8N5I2 433 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 MITD1Q8WV92 249 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 RBPMSQ93062 196 aaKnown RBP12.22□□□□□ -0.45
DDX56-208ENST00000467318 C1orf159Q96HA4 380 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 ARHGAP5-AS1Q96IT6 56 aa12.22□□□□□ -0.45
DDX56-208ENST00000467318 POLR3KQ9Y2Y1 108 aaPredicted RBP12.22□□□□□ -0.45
DDX56-208ENST00000467318 ITPR3Q14573 2671 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 TRBV23-1A0A0A0MS06 115 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 B4DSR2 109 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 PHF1O43189 567 aaPredicted RBP12.21□□□□□ -0.45
DDX56-208ENST00000467318 FCN3O75636 299 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 HLA-AP01891 365 aaKnown RBP12.21□□□□□ -0.45
DDX56-208ENST00000467318 HIST1H1DP16402 221 aaKnown RBP12.21□□□□□ -0.45
DDX56-208ENST00000467318 CYCSP99999 105 aaKnown RBP12.21□□□□□ -0.45
DDX56-208ENST00000467318 ZNF345Q14585 488 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 VAX1Q5SQQ9 334 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 DCAF12L2Q5VW00 463 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 BRICD5Q6PL45 260 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 TMEM17Q86X19 198 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 MAPK1IP1LQ8NDC0 245 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 OR4K15Q8NH41 348 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 OCSTAMPQ9BR26 566 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 FAAP24Q9BTP7 215 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 PDCD10Q9BUL8 212 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 PECRQ9BY49 303 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 SLC25A32Q9H2D1 315 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 NCOR1P1Q9H4R4 102 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 ZMAT3Q9HA38 289 aaKnown RBP12.21□□□□□ -0.45
DDX56-208ENST00000467318 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.21□□□□□ -0.45
DDX56-208ENST00000467318 VSIG4Q9Y279 399 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 MED13LQ71F56 2210 aa12.21□□□□□ -0.45
DDX56-208ENST00000467318 LOC105371242A0A075B767 164 aa12.2□□□□□ -0.46
DDX56-208ENST00000467318 C9orf170A2RU37 121 aa12.2□□□□□ -0.46
DDX56-208ENST00000467318 OR5H14A6NHG9 310 aa12.2□□□□□ -0.46
DDX56-208ENST00000467318 H7C1Q1 480 aa12.2□□□□□ -0.46
DDX56-208ENST00000467318 MFNGO00587 321 aa12.2□□□□□ -0.46
DDX56-208ENST00000467318 EDDM3BP56851 147 aa12.2□□□□□ -0.46
DDX56-208ENST00000467318 RPL31P62899 125 aaKnown RBP12.2□□□□□ -0.46
DDX56-208ENST00000467318 MEF2CQ06413 473 aaPredicted RBP12.2□□□□□ -0.46
DDX56-208ENST00000467318 AESQ08117 197 aa12.2□□□□□ -0.46
DDX56-208ENST00000467318 ATXN7L3Q14CW9 347 aaPredicted RBP12.2□□□□□ -0.46
DDX56-208ENST00000467318 TMEM249Q2WGJ8 235 aa12.2□□□□□ -0.46
DDX56-208ENST00000467318 KRBOX4Q5JUW0 171 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms