RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 SCTP09683 121 aa11.72□□□□□ -0.53
DNMT3A-208ENST00000466601 ELK1P19419 428 aa11.72□□□□□ -0.53
DNMT3A-208ENST00000466601 DTYMKP23919 212 aa11.72□□□□□ -0.53
DNMT3A-208ENST00000466601 MNDAP41218 407 aa11.72□□□□□ -0.53
DNMT3A-208ENST00000466601 TMEM69Q5SWH9 247 aa11.72□□□□□ -0.53
DNMT3A-208ENST00000466601 OR10V1Q8NGI7 309 aa11.72□□□□□ -0.53
DNMT3A-208ENST00000466601 NUDCD2Q8WVJ2 157 aa11.72□□□□□ -0.53
DNMT3A-208ENST00000466601 IL1F10Q8WWZ1 152 aa11.72□□□□□ -0.53
DNMT3A-208ENST00000466601 MEGF9Q9H1U4 602 aa11.72□□□□□ -0.53
DNMT3A-208ENST00000466601 MMP28Q9H239 520 aa11.72□□□□□ -0.53
DNMT3A-208ENST00000466601 AUNIPQ9H7T9 357 aa11.72□□□□□ -0.53
DNMT3A-208ENST00000466601 ZNRD1Q9P1U0 126 aa11.72□□□□□ -0.53
DNMT3A-208ENST00000466601 DPM3Q9P2X0 92 aa11.72□□□□□ -0.53
DNMT3A-208ENST00000466601 ZNF230Q9UIE0 474 aaPredicted RBP11.72□□□□□ -0.53
DNMT3A-208ENST00000466601 JPT1Q9UK76 154 aa11.72□□□□□ -0.53
DNMT3A-208ENST00000466601 ZFHX3Q15911 3703 aa11.72□□□□□ -0.53
DNMT3A-208ENST00000466601 A0A1W2PPE3 182 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 FAM25AB3EWG3 89 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 FAM25CB3EWG5 89 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 FAM25GB3EWG6 89 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 BUB1B-PAK6H3BSN5 160 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 KIR2DS4P43632 304 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 TAS2R20P59543 309 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 GNMTQ14749 295 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 KIR2DS1Q14954 304 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 SSX2Q16385 188 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 SRSF7Q16629 238 aaKnown RBP eCLIP11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 Q3ZCU0 254 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 MORN2Q502X0 79 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 STEAP3Q658P3 488 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 LDLRAD3Q86YD5 345 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 ZDHHC22Q8N966 263 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 C8orf31Q8N9H6 132 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 MAFIPQ8WZ33 124 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 CREB3L1Q96BA8 519 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 ST6GALNAC5Q9BVH7 336 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 ESM1Q9NQ30 184 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 NDUFA13Q9P0J0 144 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 AMMECR1Q9Y4X0 333 aaPredicted RBP11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 HILPDAQ9Y5L2 63 aa11.71□□□□□ -0.53
DNMT3A-208ENST00000466601 DPPA5A6NC42 116 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 DNAJC9-AS1A6NH13 148 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 LEUTXA8MZ59 168 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 CTDSP2O14595 271 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 RGS5O15539 181 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 FABP7O15540 132 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 HOXA3O43365 443 aaPredicted RBP11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 SSX5O60225 188 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 YPEL1O60688 119 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 RGS11O94810 467 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 GSTT2P0CG29 244 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 GSTT2BP0CG30 244 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 PTHLHP12272 177 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 PAX6P26367 422 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 PPP1CCP36873 323 aaKnown RBP11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 SRSF2Q01130 221 aaKnown RBP11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 Q6ZS49 121 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 DYNAPQ8N1N2 210 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 LINC00311Q8N616 119 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 OR4A4PQ8NGN8 299 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 OR10X1Q8NGY0 326 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 DUX5Q96PT3 197 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 YPEL2Q96QA6 119 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 SLIRPQ9GZT3 109 aaKnown RBP11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 MXRA5Q9NR99 2828 aa11.7□□□□□ -0.54
DNMT3A-208ENST00000466601 LY6LH3BQJ8 138 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 SLC31A2O15432 143 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 HLA-DQB1P01920 261 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 CEACAM3P40198 252 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 IER3P46695 156 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 ZNF134P52741 427 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 SLC9A3R2Q15599 337 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 CT45A1Q5HYN5 189 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 LY6G6FQ5SQ64 297 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 TPTE2P1Q5T6R2 138 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 SLC25A48Q6ZT89 311 aaKnown RBP11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 TMEM86BQ8N661 226 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 ZNF439Q8NDP4 499 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 CT45A3Q8NHU0 189 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 SSMEM1Q8WWF3 244 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 DGCR14Q96DF8 476 aaKnown RBP11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 SSX3Q99909 188 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 OCSTAMPQ9BR26 566 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 DCUN1D5Q9BTE7 237 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 MIXL1Q9H2W2 232 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 DPAGT1Q9H3H5 408 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 TNFRSF19Q9NS68 423 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 SLC23A1Q9UHI7 598 aa11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 MRPS7Q9Y2R9 242 aaKnown RBP11.69□□□□□ -0.54
DNMT3A-208ENST00000466601 CUBNO60494 3623 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 IGKV1D-8A0A087WSZ0 117 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 IGKV1-6A0A0C4DH72 117 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 TRIM77I1YAP6 450 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 HSPA12AO43301 675 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 IGHV4-59P01825 116 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 ZBTB25P24278 435 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 CEACAM6P40199 344 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 CBX5P45973 191 aa11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 UBA52P62987 128 aaKnown RBP11.68□□□□□ -0.54
DNMT3A-208ENST00000466601 MADCAM1Q13477 382 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms