RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 F2RL1P55085 397 aa15.02■□□□□ -0
COL9A3-206ENST00000466532 GP2P55259 537 aaKnown RBP15.02■□□□□ -0
COL9A3-206ENST00000466532 TAS2R43P59537 309 aa15.02■□□□□ -0
COL9A3-206ENST00000466532 DCTN2Q13561 401 aaKnown RBP15.02■□□□□ -0
COL9A3-206ENST00000466532 CDH26Q8IXH8 852 aa15.02■□□□□ -0
COL9A3-206ENST00000466532 OR8U1Q8NH10 309 aa15.02■□□□□ -0
COL9A3-206ENST00000466532 TFAP2CQ92754 450 aa15.02■□□□□ -0
COL9A3-206ENST00000466532 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.02■□□□□ -0
COL9A3-206ENST00000466532 UBE2QL1A1L167 161 aa15.01□□□□□ -0.01
COL9A3-206ENST00000466532 FAM90A10PA6NDY2 464 aa15.01□□□□□ -0.01
COL9A3-206ENST00000466532 FAM90A7PA6NKC0 464 aa15.01□□□□□ -0.01
COL9A3-206ENST00000466532 FAM90A23PA8MXZ1 464 aa15.01□□□□□ -0.01
COL9A3-206ENST00000466532 CA11O75493 328 aa15.01□□□□□ -0.01
COL9A3-206ENST00000466532 CRTAPO75718 401 aaPredicted RBP15.01□□□□□ -0.01
COL9A3-206ENST00000466532 VDAC1P21796 283 aa15.01□□□□□ -0.01
COL9A3-206ENST00000466532 VHLP40337 213 aa15.01□□□□□ -0.01
COL9A3-206ENST00000466532 CDX1P47902 265 aaPredicted RBP15.01□□□□□ -0.01
COL9A3-206ENST00000466532 ADARB1P78563 741 aaKnown RBP15.01□□□□□ -0.01
COL9A3-206ENST00000466532 CFHR3Q02985 330 aa15.01□□□□□ -0.01
COL9A3-206ENST00000466532 DOC2BQ14184 412 aa15.01□□□□□ -0.01
COL9A3-206ENST00000466532 KIR2DS1Q14954 304 aa15.01□□□□□ -0.01
COL9A3-206ENST00000466532 DHRSXQ8N5I4 330 aa15.01□□□□□ -0.01
COL9A3-206ENST00000466532 RNF152Q8N8N0 203 aa15.01□□□□□ -0.01
COL9A3-206ENST00000466532 Q96M66 194 aa15.01□□□□□ -0.01
COL9A3-206ENST00000466532 DERL3Q96Q80 235 aa15.01□□□□□ -0.01
COL9A3-206ENST00000466532 TAF9BQ9HBM6 251 aa15.01□□□□□ -0.01
COL9A3-206ENST00000466532 OR2S2Q9NQN1 319 aa15.01□□□□□ -0.01
COL9A3-206ENST00000466532 EFCAB10A6NFE3 127 aa15□□□□□ -0.01
COL9A3-206ENST00000466532 LANCL1O43813 399 aa15□□□□□ -0.01
COL9A3-206ENST00000466532 SC5DO75845 299 aa15□□□□□ -0.01
COL9A3-206ENST00000466532 FUT3P21217 361 aa15□□□□□ -0.01
COL9A3-206ENST00000466532 LSAMPQ13449 338 aa15□□□□□ -0.01
COL9A3-206ENST00000466532 STEAP3Q658P3 488 aa15□□□□□ -0.01
COL9A3-206ENST00000466532 LYPD6Q86Y78 171 aa15□□□□□ -0.01
COL9A3-206ENST00000466532 OR5M8Q8NGP6 311 aa15□□□□□ -0.01
COL9A3-206ENST00000466532 CYYR1Q96J86 154 aa15□□□□□ -0.01
COL9A3-206ENST00000466532 KCNIP1Q9NZI2 227 aa15□□□□□ -0.01
COL9A3-206ENST00000466532 MYL12BO14950 172 aa14.99□□□□□ -0.01
COL9A3-206ENST00000466532 RAMP3O60896 148 aa14.99□□□□□ -0.01
COL9A3-206ENST00000466532 IGHG4P01861 327 aa14.99□□□□□ -0.01
COL9A3-206ENST00000466532 GLAP06280 429 aa14.99□□□□□ -0.01
COL9A3-206ENST00000466532 SLC2A2P11168 524 aaPredicted RBP14.99□□□□□ -0.01
COL9A3-206ENST00000466532 CELP19835 753 aa14.99□□□□□ -0.01
COL9A3-206ENST00000466532 MYF6P23409 242 aa14.99□□□□□ -0.01
COL9A3-206ENST00000466532 LUMP51884 338 aaPredicted RBP14.99□□□□□ -0.01
COL9A3-206ENST00000466532 GNMTQ14749 295 aa14.99□□□□□ -0.01
COL9A3-206ENST00000466532 MMDQ15546 238 aa14.99□□□□□ -0.01
COL9A3-206ENST00000466532 MORN2Q502X0 79 aa14.99□□□□□ -0.01
COL9A3-206ENST00000466532 SIGIRRQ6IA17 410 aa14.99□□□□□ -0.01
COL9A3-206ENST00000466532 PACRGLQ8N7B6 248 aa14.99□□□□□ -0.01
COL9A3-206ENST00000466532 NKAIN3Q8N8D7 197 aa14.99□□□□□ -0.01
COL9A3-206ENST00000466532 OR52L2PQ8NGH6 319 aa14.99□□□□□ -0.01
COL9A3-206ENST00000466532 FAM46BQ96A09 425 aa14.99□□□□□ -0.01
COL9A3-206ENST00000466532 KCTD7Q96MP8 289 aa14.99□□□□□ -0.01
COL9A3-206ENST00000466532 C8orf4Q9NR00 106 aa14.99□□□□□ -0.01
COL9A3-206ENST00000466532 MBNL3Q9NUK0 354 aaKnown RBP14.99□□□□□ -0.01
COL9A3-206ENST00000466532 CNOT2Q9NZN8 540 aaKnown RBP14.99□□□□□ -0.01
COL9A3-206ENST00000466532 ZNF107Q9UII5 783 aaPredicted RBP14.99□□□□□ -0.01
COL9A3-206ENST00000466532 PDCD6O75340 191 aa14.98□□□□□ -0.01
COL9A3-206ENST00000466532 IGF1P05019 195 aa14.98□□□□□ -0.01
COL9A3-206ENST00000466532 WNT4P56705 351 aa14.98□□□□□ -0.01
COL9A3-206ENST00000466532 C9orf66Q5T8R8 295 aa14.98□□□□□ -0.01
COL9A3-206ENST00000466532 AHSA2Q719I0 299 aa14.98□□□□□ -0.01
COL9A3-206ENST00000466532 C5orf24Q7Z6I8 188 aa14.98□□□□□ -0.01
COL9A3-206ENST00000466532 MRPL30Q8TCC3 161 aaKnown RBP14.98□□□□□ -0.01
COL9A3-206ENST00000466532 THRSPQ92748 146 aa14.98□□□□□ -0.01
COL9A3-206ENST00000466532 UQCC2Q9BRT2 126 aa14.98□□□□□ -0.01
COL9A3-206ENST00000466532 ABHD14AQ9BUJ0 271 aa14.98□□□□□ -0.01
COL9A3-206ENST00000466532 JPT1Q9UK76 154 aa14.98□□□□□ -0.01
COL9A3-206ENST00000466532 CD1AP06126 327 aa14.97□□□□□ -0.01
COL9A3-206ENST00000466532 MAPK3P27361 379 aaPredicted RBP14.97□□□□□ -0.01
COL9A3-206ENST00000466532 PSMB8P28062 276 aa14.97□□□□□ -0.01
COL9A3-206ENST00000466532 PPP1CCP36873 323 aaKnown RBP14.97□□□□□ -0.01
COL9A3-206ENST00000466532 ZNF554Q86TJ5 538 aa14.97□□□□□ -0.01
COL9A3-206ENST00000466532 C8orf59Q8N0T1 100 aaPredicted RBP14.97□□□□□ -0.01
COL9A3-206ENST00000466532 C4orf3Q8WVX3 66 aa14.97□□□□□ -0.01
COL9A3-206ENST00000466532 ZNF580Q9UK33 172 aa14.97□□□□□ -0.01
COL9A3-206ENST00000466532 NBEAL2Q6ZNJ1 2754 aa14.96□□□□□ -0.01
COL9A3-206ENST00000466532 GNAO1P09471 354 aa14.96□□□□□ -0.01
COL9A3-206ENST00000466532 OR5H8P0DN80 308 aa14.96□□□□□ -0.01
COL9A3-206ENST00000466532 ACTBP60709 375 aa14.96□□□□□ -0.01
COL9A3-206ENST00000466532 NKAPLQ5M9Q1 402 aa14.96□□□□□ -0.01
COL9A3-206ENST00000466532 LAIR2Q6ISS4 152 aa14.96□□□□□ -0.01
COL9A3-206ENST00000466532 ODF3L1Q8IXM7 274 aa14.96□□□□□ -0.01
COL9A3-206ENST00000466532 WWC2-AS2Q96NR7 200 aa14.96□□□□□ -0.01
COL9A3-206ENST00000466532 MRPL20Q9BYC9 149 aaKnown RBP14.96□□□□□ -0.01
COL9A3-206ENST00000466532 CST11Q9H112 138 aa14.96□□□□□ -0.01
COL9A3-206ENST00000466532 GHRLQ9UBU3 117 aa14.96□□□□□ -0.01
COL9A3-206ENST00000466532 PSORS1C1Q9UIG5 152 aa14.96□□□□□ -0.01
COL9A3-206ENST00000466532 SEC14L6B5MCN3 397 aa14.95□□□□□ -0.02
COL9A3-206ENST00000466532 YPEL1O60688 119 aa14.95□□□□□ -0.02
COL9A3-206ENST00000466532 CNTFRP26992 372 aa14.95□□□□□ -0.02
COL9A3-206ENST00000466532 HTD2P86397 168 aa14.95□□□□□ -0.02
COL9A3-206ENST00000466532 NANOGP1Q8N7R0 232 aa14.95□□□□□ -0.02
COL9A3-206ENST00000466532 BPIFB6Q8NFQ5 453 aa14.95□□□□□ -0.02
COL9A3-206ENST00000466532 OR11H1Q8NG94 326 aa14.95□□□□□ -0.02
COL9A3-206ENST00000466532 YPEL2Q96QA6 119 aa14.95□□□□□ -0.02
COL9A3-206ENST00000466532 PRR25Q96S07 402 aa14.95□□□□□ -0.02
COL9A3-206ENST00000466532 NABP2Q9BQ15 211 aa14.95□□□□□ -0.02
COL9A3-206ENST00000466532 ZNF251Q9BRH9 671 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms