RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 RCL1Q9Y2P8 373 aaKnown RBP11.35□□□□□ -0.59
UBE4B-206ENST00000466379 PLCE1Q9P212 2302 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 IGHV3-43A0A0B4J1X8 118 aa11.34□□□□□ -0.59
UBE4B-206ENST00000466379 OOEPA6NGQ2 149 aa11.34□□□□□ -0.59
UBE4B-206ENST00000466379 H0Y980 276 aa11.34□□□□□ -0.59
UBE4B-206ENST00000466379 IGHV1-46P01743 117 aa11.34□□□□□ -0.59
UBE4B-206ENST00000466379 IGHV3-43DP0DP04 118 aa11.34□□□□□ -0.59
UBE4B-206ENST00000466379 IL2RGP31785 369 aa11.34□□□□□ -0.59
UBE4B-206ENST00000466379 UCNP55089 124 aa11.34□□□□□ -0.59
UBE4B-206ENST00000466379 TNFAIP6P98066 277 aaPredicted RBP11.34□□□□□ -0.59
UBE4B-206ENST00000466379 RFESDQ8TAC1 157 aa11.34□□□□□ -0.59
UBE4B-206ENST00000466379 RND1Q92730 232 aa11.34□□□□□ -0.59
UBE4B-206ENST00000466379 REG4Q9BYZ8 158 aa11.34□□□□□ -0.59
UBE4B-206ENST00000466379 NBEAQ8NFP9 2946 aa11.34□□□□□ -0.59
UBE4B-206ENST00000466379 IFNL4K9M1U5 179 aa11.34□□□□□ -0.59
UBE4B-206ENST00000466379 TPT1P13693 172 aaKnown RBP11.34□□□□□ -0.59
UBE4B-206ENST00000466379 SELENOVP59797 346 aa11.34□□□□□ -0.59
UBE4B-206ENST00000466379 LTC4SQ16873 150 aa11.34□□□□□ -0.59
UBE4B-206ENST00000466379 RPL7L1Q6DKI1 246 aaKnown RBP11.34□□□□□ -0.59
UBE4B-206ENST00000466379 ADAM5Q6NVV9 412 aa11.34□□□□□ -0.59
UBE4B-206ENST00000466379 TGIF2LYQ8IUE0 185 aa11.34□□□□□ -0.59
UBE4B-206ENST00000466379 RBPMSQ93062 196 aaKnown RBP11.34□□□□□ -0.59
UBE4B-206ENST00000466379 GALMQ96C23 342 aa11.34□□□□□ -0.59
UBE4B-206ENST00000466379 SDHAF2Q9NX18 166 aa11.34□□□□□ -0.59
UBE4B-206ENST00000466379 ZZEF1O43149 2961 aa11.33□□□□□ -0.59
UBE4B-206ENST00000466379 CACNA1DQ01668 2161 aa11.33□□□□□ -0.59
UBE4B-206ENST00000466379 A0A0G2JRQ6 117 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 ZNF737O75373 536 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 CYB5R3P00387 301 aaPredicted RBP11.33□□□□□ -0.6
UBE4B-206ENST00000466379 S100GP29377 79 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 PPP1CCP36873 323 aaKnown RBP11.33□□□□□ -0.6
UBE4B-206ENST00000466379 BAP18Q8IXM2 172 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 ZNRF1Q8ND25 227 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 NUP37Q8NFH4 326 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 OR5D13Q8NGL4 314 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 OR10Z1Q8NGY1 313 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 STOML3Q8TAV4 291 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 TMED6Q8WW62 240 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 ERGIC1Q969X5 290 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 WFIKKN1Q96NZ8 548 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 SLC25A32Q9H2D1 315 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 FBXL17Q9UF56 701 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 A0A1B0GW55 424 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 E5RGE8 158 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 ST8SIA3O43173 380 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 DUX4L2P0CJ85 424 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 DUX4L3P0CJ86 424 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 DUX4L4P0CJ87 422 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 DUX4L5P0CJ88 424 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 DUX4L6P0CJ89 424 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 DUX4L7P0CJ90 424 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 SELLP14151 372 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 EPHA1P21709 976 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 PTAFRP25105 342 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 IZUMO4Q1ZYL8 232 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 CXorf66Q5JRM2 361 aaPredicted RBP11.33□□□□□ -0.6
UBE4B-206ENST00000466379 DUX4L9Q6RFH8 374 aaPredicted RBP11.33□□□□□ -0.6
UBE4B-206ENST00000466379 ZCCHC24Q8N2G6 241 aaKnown RBP11.33□□□□□ -0.6
UBE4B-206ENST00000466379 ZNF808Q8N4W9 903 aaPredicted RBP11.33□□□□□ -0.6
UBE4B-206ENST00000466379 DRAM1Q8N682 238 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 DMBX1Q8NFW5 382 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 ARL11Q969Q4 196 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 PHYHIPLQ96FC7 376 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 MAGT1Q9H0U3 335 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 GCM1Q9NP62 436 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 DUX4Q9UBX2 424 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 PFDN2Q9UHV9 154 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 NSG2Q9Y328 171 aa11.33□□□□□ -0.6
UBE4B-206ENST00000466379 ADGRG4Q8IZF6 3080 aa11.32□□□□□ -0.6
UBE4B-206ENST00000466379 MFSD2BA6NFX1 497 aa11.32□□□□□ -0.6
UBE4B-206ENST00000466379 DEFB108AA8MXU0 73 aa11.32□□□□□ -0.6
UBE4B-206ENST00000466379 LHBP01229 141 aa11.32□□□□□ -0.6
UBE4B-206ENST00000466379 C1QTNF9P0C862 333 aa11.32□□□□□ -0.6
UBE4B-206ENST00000466379 TMEM33P57088 247 aa11.32□□□□□ -0.6
UBE4B-206ENST00000466379 POLR2GP62487 172 aaKnown RBP eCLIP11.32□□□□□ -0.6
UBE4B-206ENST00000466379 NMSQ5H8A3 153 aa11.32□□□□□ -0.6
UBE4B-206ENST00000466379 PLPPR2Q96GM1 343 aa11.32□□□□□ -0.6
UBE4B-206ENST00000466379 C5orf30Q96GV9 206 aa11.32□□□□□ -0.6
UBE4B-206ENST00000466379 OR2D2Q9H210 308 aa11.32□□□□□ -0.6
UBE4B-206ENST00000466379 POMT1Q9Y6A1 747 aa11.32□□□□□ -0.6
UBE4B-206ENST00000466379 SERPINE2P07093 398 aa11.32□□□□□ -0.6
UBE4B-206ENST00000466379 OR4A8P0C604 315 aa11.32□□□□□ -0.6
UBE4B-206ENST00000466379 CFHR2P36980 270 aa11.32□□□□□ -0.6
UBE4B-206ENST00000466379 P2RX3P56373 397 aa11.32□□□□□ -0.6
UBE4B-206ENST00000466379 ADIPOQQ15848 244 aa11.32□□□□□ -0.6
UBE4B-206ENST00000466379 DEFB108BQ8NET1 73 aa11.32□□□□□ -0.6
UBE4B-206ENST00000466379 VKORC1Q9BQB6 163 aa11.32□□□□□ -0.6
UBE4B-206ENST00000466379 RELNP78509 3460 aa11.31□□□□□ -0.6
UBE4B-206ENST00000466379 RAI1Q7Z5J4 1906 aaPredicted RBP11.31□□□□□ -0.6
UBE4B-206ENST00000466379 IGKV1-39P01597 117 aa11.31□□□□□ -0.6
UBE4B-206ENST00000466379 IGKV1D-39P04432 117 aa11.31□□□□□ -0.6
UBE4B-206ENST00000466379 VDAC1P21796 283 aa11.31□□□□□ -0.6
UBE4B-206ENST00000466379 NKX2-1P43699 371 aaPredicted RBP11.31□□□□□ -0.6
UBE4B-206ENST00000466379 CCL8P80075 99 aa11.31□□□□□ -0.6
UBE4B-206ENST00000466379 AKR1E2Q96JD6 320 aa11.31□□□□□ -0.6
UBE4B-206ENST00000466379 IL19Q9UHD0 177 aa11.31□□□□□ -0.6
UBE4B-206ENST00000466379 LGALS8O00214 317 aa11.3□□□□□ -0.6
UBE4B-206ENST00000466379 SSSCA1O60232 199 aa11.3□□□□□ -0.6
UBE4B-206ENST00000466379 ASCL1P50553 236 aa11.3□□□□□ -0.6
UBE4B-206ENST00000466379 OR2B11Q5JQS5 317 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms