RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 GABRA2P47869 451 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 P2RX3P56373 397 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 DSCR9P59020 149 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 UBE2MP61081 183 aaKnown RBP4.53□□□□□ -1.68
VPS41-211ENST00000466017 HLA-DRB3P79483 266 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 HTD2P86397 168 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 DHODHQ02127 395 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 MADCAM1Q13477 382 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 MSMO1Q15800 293 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 Q3ZCU0 254 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 CHRFAM7AQ494W8 412 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 KRBOX4Q5JUW0 171 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 C6orf183Q5T699 404 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 LPCAT3Q6P1A2 487 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 FAHD2BQ6P2I3 314 aaPredicted RBP4.53□□□□□ -1.68
VPS41-211ENST00000466017 ZNF782Q6ZMW2 699 aaPredicted RBP4.53□□□□□ -1.68
VPS41-211ENST00000466017 RTN4RL2Q86UN3 420 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 TMEM185AQ8NFB2 350 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 OR52M1Q8NGK5 317 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 OR13C8Q8NGS7 320 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 OR5H2Q8NGV7 314 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 C8orf46Q8TAG6 207 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 PLPPR1Q8TBJ4 325 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 ENKURQ8TC29 256 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 NTN5Q8WTR8 489 aaPredicted RBP4.53□□□□□ -1.68
VPS41-211ENST00000466017 DYRK2Q92630 601 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 FAHD2AQ96GK7 314 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 TIMD4Q96H15 378 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 COQ2Q96H96 371 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 Q96MF0 132 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 SLC6A7Q99884 636 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 TMEM246Q9BRR3 403 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 TINAGL1Q9GZM7 467 aaPredicted RBP4.53□□□□□ -1.68
VPS41-211ENST00000466017 PPA2Q9H2U2 334 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 GHITMQ9H3K2 345 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 UNKLQ9H9P5 680 aaKnown RBP4.53□□□□□ -1.68
VPS41-211ENST00000466017 UBTD1Q9HAC8 227 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 NECAP2Q9NVZ3 263 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 KCNIP1Q9NZI2 227 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 OR14J1Q9UGF5 321 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 TRAPPC2LQ9UL33 140 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 GPR132Q9UNW8 380 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 FAM208BQ5VWN6 2430 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 ITPR1Q14643 2758 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 DOPEY1Q5JWR5 2465 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 IGHV3-64DA0A0J9YX35 117 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 hADV38S2A0JD32 116 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 ODAMA1E959 279 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 C7orf66A4D0T2 115 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 NKX6-3A6NJ46 265 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 ZNF729A6NN14 1252 aaPredicted RBP4.52□□□□□ -1.69
VPS41-211ENST00000466017 SNRPGP15A8MWD9 76 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 F5H0A9 414 aaPredicted RBP4.52□□□□□ -1.69
VPS41-211ENST00000466017 C15orf65H3BRN8 121 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 F2RL2O00254 374 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 NDUFB3O43676 98 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 YPEL1O60688 119 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 SLC22A5O76082 557 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 DHFRP00374 187 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 PMP2P02689 132 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 GYPAP02724 150 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 SCTP09683 121 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 GSTT2P0CG29 244 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 TRAPPC2P0DI81 140 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 TRAPPC2BP0DI82 140 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 OR5H8P0DN80 308 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 AESQ08117 197 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 LRRC10Q5BKY1 277 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 FAM201AQ5SY85 155 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 AADACL3Q5VUY0 350 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 SFRP4Q6FHJ7 346 aaPredicted RBP4.52□□□□□ -1.69
VPS41-211ENST00000466017 OR52W1Q6IF63 320 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 ZNF841Q6ZN19 808 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 TGIF2LYQ8IUE0 185 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 LRRC75A-AS1Q8N1F1 130 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 BATF2Q8N1L9 274 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 SPICQ8N5J4 248 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 ZBTB34Q8NCN2 500 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 ZNRF1Q8ND25 227 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 LY6G5BQ8NDX9 201 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 OR5T2Q8NGG2 359 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 OR51S1Q8NGJ8 323 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 NEK7Q8TDX7 302 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 MOB3AQ96BX8 217 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 GALMQ96C23 342 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 ZNF486Q96H40 463 aaPredicted RBP4.52□□□□□ -1.69
VPS41-211ENST00000466017 AKR1E2Q96JD6 320 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 YPEL2Q96QA6 119 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 CCL13Q99616 98 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 HDHD3Q9BSH5 251 aaPredicted RBP4.52□□□□□ -1.69
VPS41-211ENST00000466017 C1orf43Q9BWL3 253 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 PATZ1Q9HBE1 687 aaKnown RBP4.52□□□□□ -1.69
VPS41-211ENST00000466017 TAF9BQ9HBM6 251 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 DCAF16Q9NXF7 216 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 ZNF230Q9UIE0 474 aaPredicted RBP4.52□□□□□ -1.69
VPS41-211ENST00000466017 RALYQ9UKM9 306 aaKnown RBP4.52□□□□□ -1.69
VPS41-211ENST00000466017 UBE2J1Q9Y385 318 aaPredicted RBP4.52□□□□□ -1.69
VPS41-211ENST00000466017 LINC00312Q9Y6C7 94 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 PKDREJQ9NTG1 2253 aa4.52□□□□□ -1.69
VPS41-211ENST00000466017 EPG5Q9HCE0 2579 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms