RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 SLC25A40Q8TBP6 338 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 DTD1Q8TEA8 209 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 MARVELD3Q96A59 401 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 SLC35E1Q96K37 410 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 WFIKKN1Q96NZ8 548 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 TMEM9BQ9NQ34 198 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 PRSS50Q9UI38 385 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 ATP23Q9Y6H3 246 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 IGKV1D-8A0A087WSZ0 117 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 CRYM-AS1A6NIL9 109 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 LINC00587B1AMM8 73 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 RPL36A-HNRNPH2H7BZ11 118 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 WISP1O95388 367 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 APOA2P02652 100 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 APELAP0DMC3 54 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 F2RP25116 425 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 PAX6P26367 422 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 CASP6P55212 293 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 UBE2G1P62253 170 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 FAM3AP98173 230 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 CALHM1Q8IU99 346 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 OR5B3Q8NH48 314 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 VOPP1Q96AW1 172 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 Q96M66 194 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 GPR61Q9BZJ8 451 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 PRDM6Q9NQX0 595 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 OR1A1Q9P1Q5 309 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 CACFD1Q9UGQ2 172 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 ZSWIM8A7E2V4 1837 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 IGKV1-9A0A0C4DH69 117 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 C5orf63A6NC05 138 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 DNASE2O00115 360 aaPredicted RBP7.84□□□□□ -1.15
HPS4-208ENST00000464362 EGR1P18146 543 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 NUFIP2Q7Z417 695 aaKnown RBP7.84□□□□□ -1.15
HPS4-208ENST00000464362 POC1AQ8NBT0 407 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 IL36RNQ9UBH0 155 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 GBF1Q92538 1859 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 LINC00271P0C7V0 271 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 RND3P61587 244 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 SLC35B1P78383 322 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 HFEQ30201 348 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 STUMQ69YW2 141 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 SMIM15Q7Z3B0 74 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 C1orf210Q8IVY1 113 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 UBALD2Q8IYN6 164 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 OR10S1Q8NGN2 331 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 CMTM2Q8TAZ6 248 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 M1APQ8TC57 530 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 PRR14LQ5THK1 2151 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 LRRK1Q38SD2 2015 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 IGHV3OR15-7A0A075B7D8 119 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 TRA2AQ13595 282 aaKnown RBP eCLIP7.83□□□□□ -1.16
HPS4-208ENST00000464362 RNPS1Q15287 305 aaKnown RBP7.83□□□□□ -1.16
HPS4-208ENST00000464362 PACRGQ96M98 296 aaPredicted RBP7.83□□□□□ -1.16
HPS4-208ENST00000464362 RTBDNQ9BSG5 229 aaPredicted RBP7.83□□□□□ -1.16
HPS4-208ENST00000464362 RNF126Q9BV68 326 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 NAT8BQ9UHF3 227 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 MPC1Q9Y5U8 109 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 C11orf94C9JXX5 98 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 ZNF25P17030 456 aaPredicted RBP7.83□□□□□ -1.16
HPS4-208ENST00000464362 MDH2P40926 338 aaKnown RBP7.83□□□□□ -1.16
HPS4-208ENST00000464362 CFHR1Q03591 330 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 IGFBP7Q16270 282 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 ATP1A1-AS1Q5TC04 95 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 C5orf24Q7Z6I8 188 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 SIGLECL1Q8N7X8 197 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 OR2M7Q8NG81 312 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 MRPL30Q8TCC3 161 aaKnown RBP7.83□□□□□ -1.16
HPS4-208ENST00000464362 TMEM222Q9H0R3 208 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 LAMA2P24043 3122 aaKnown RBP7.83□□□□□ -1.16
HPS4-208ENST00000464362 HAND1O96004 215 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 GAPDHP04406 335 aaKnown RBP7.83□□□□□ -1.16
HPS4-208ENST00000464362 CELA3AP09093 270 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 ZNF735P0CB33 412 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 EIF3IQ13347 325 aaKnown RBP7.83□□□□□ -1.16
HPS4-208ENST00000464362 ASPHD2Q6ICH7 369 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 ZNF818PQ6ZRF7 136 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 OR52L2PQ8NGH6 319 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 OR5D13Q8NGL4 314 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 FGF11Q92914 225 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 HIST1H2BAQ96A08 127 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 NEIL1Q96FI4 390 aaPredicted RBP7.83□□□□□ -1.16
HPS4-208ENST00000464362 MS4A10Q96PG2 267 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 TAAR6Q96RI8 345 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 ABHD14AQ9BUJ0 271 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 KCNIP2Q9NS61 270 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 ZNF835Q9Y2P0 537 aa7.83□□□□□ -1.16
HPS4-208ENST00000464362 NLRC5Q86WI3 1866 aa7.82□□□□□ -1.16
HPS4-208ENST00000464362 TGIF2-C20orf24A0A0A6YYL0 155 aa7.82□□□□□ -1.16
HPS4-208ENST00000464362 A0A0G2JMM0 328 aa7.82□□□□□ -1.16
HPS4-208ENST00000464362 A0A1W2PPB8 328 aa7.82□□□□□ -1.16
HPS4-208ENST00000464362 A0A1W2PRS3 328 aa7.82□□□□□ -1.16
HPS4-208ENST00000464362 KIR3DP1A8MWS1 328 aa7.82□□□□□ -1.16
HPS4-208ENST00000464362 J3QT63 122 aa7.82□□□□□ -1.16
HPS4-208ENST00000464362 HLA-GP17693 338 aa7.82□□□□□ -1.16
HPS4-208ENST00000464362 DCAF10Q5QP82 559 aa7.82□□□□□ -1.16
HPS4-208ENST00000464362 SSX7Q7RTT5 188 aa7.82□□□□□ -1.16
HPS4-208ENST00000464362 CISD2Q8N5K1 135 aaKnown RBP7.82□□□□□ -1.16
HPS4-208ENST00000464362 OR5A2Q8NGI9 324 aa7.82□□□□□ -1.16
HPS4-208ENST00000464362 OR2T10Q8NGZ9 312 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms