RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 OR7C1O76099 320 aaPredicted RBP6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 PDGFBP01127 241 aaPredicted RBP6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 LCATP04180 440 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 CRYGSP22914 178 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 OR3A1P47881 315 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 TDGF1P3P51864 188 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 RRADP55042 308 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 FGF12P61328 243 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 PPP1CBP62140 327 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 RPS18P62269 152 aaKnown RBP6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF92Q03936 586 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 FOXL1Q12952 345 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 C1orf61Q13536 156 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 CXorf66Q5JRM2 361 aaPredicted RBP6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 COL5A1-AS1Q5SY13 56 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 C9orf50Q5SZB4 431 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 TSPO2Q5TGU0 170 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 PLCXD3Q63HM9 321 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 LCN15Q6UWW0 184 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 ANKRD37Q7Z713 158 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 RTN4RL2Q86UN3 420 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 GAPTQ8N292 157 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 TCTEX1D1Q8N7M0 179 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 FADS6Q8N9I5 356 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 SUMF1Q8NBK3 374 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 ZBTB34Q8NCN2 500 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 OR10J5Q8NHC4 309 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 CPT1CQ8TCG5 803 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 LMX1AQ8TE12 382 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 WFIKKN1Q96NZ8 548 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 MS4A10Q96PG2 267 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 SIGLEC12Q96PQ1 595 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 MIEN1Q9BRT3 115 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 HDHD3Q9BSH5 251 aaPredicted RBP6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 TMEM147Q9BVK8 224 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 RBM24Q9BX46 236 aaKnown RBP6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 WDR61Q9GZS3 305 aaKnown RBP6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF665Q9H7R5 613 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 SLC7A10Q9NS82 523 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 RNF115Q9Y4L5 304 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 ATP23Q9Y6H3 246 aa6.16□□□□□ -1.42
CLSTN1-204ENST00000464286 THADAQ6YHU6 1953 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF705FA8MVS1 300 aaPredicted RBP6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 A8MXE2 369 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 H3BMH7 237 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 MPDU1O75352 247 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 PGLYRP1O75594 196 aaPredicted RBP6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 SYNGR4O95473 234 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 NAPSAO96009 420 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 GYPAP02724 150 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF705DP0CH99 300 aaPredicted RBP6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF705BP0CI00 300 aaPredicted RBP6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF25P17030 456 aaPredicted RBP6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 GABRG2P18507 467 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 CD27P26842 260 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 GFERP55789 205 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 RPL23P62829 140 aaKnown RBP6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 RPP30P78346 268 aaKnown RBP6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 HERPUD1Q15011 391 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF542PQ5EBM4 170 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 TMEM240Q5SV17 173 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 RIPPLY2Q5TAB7 128 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF880Q6PDB4 577 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 CRIP3Q6Q6R5 217 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 PARM1Q6UWI2 310 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 RNF144BQ7Z419 303 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 ZNF525Q8N782 197 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 NFAM1Q8NET5 270 aaPredicted RBP6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 OR11L1Q8NGX0 322 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 OR1L3Q8NH93 324 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 POC1BQ8TC44 478 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 MRPL30Q8TCC3 161 aaKnown RBP6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 NEK7Q8TDX7 302 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 KCNE4Q8WWG9 221 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 ZCCHC14Q8WYQ9 949 aaKnown RBP6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 TAF15Q92804 592 aaKnown RBP eCLIP6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 NABP1Q96AH0 204 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 SPACA9Q96E40 222 aaPredicted RBP6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 ABHD14AQ9BUJ0 271 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 LIME1Q9H400 295 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 OR2W1Q9Y3N9 320 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 TRAPPC1Q9Y5R8 145 aa6.15□□□□□ -1.42
CLSTN1-204ENST00000464286 hCG_38984A0A1B0GV85 526 aa6.14□□□□□ -1.43
CLSTN1-204ENST00000464286 MDFIC2A0A1B0GVS7 189 aa6.14□□□□□ -1.43
CLSTN1-204ENST00000464286 A0A1W2PPQ1 181 aa6.14□□□□□ -1.43
CLSTN1-204ENST00000464286 FAM221AA4D161 298 aa6.14□□□□□ -1.43
CLSTN1-204ENST00000464286 SLC22A20A6NK97 555 aa6.14□□□□□ -1.43
CLSTN1-204ENST00000464286 FAM166BA8MTA8 275 aa6.14□□□□□ -1.43
CLSTN1-204ENST00000464286 TRAPPC2LH3BP13 241 aa6.14□□□□□ -1.43
CLSTN1-204ENST00000464286 TNFSF11O14788 317 aa6.14□□□□□ -1.43
CLSTN1-204ENST00000464286 SPRY1O43609 319 aaPredicted RBP6.14□□□□□ -1.43
CLSTN1-204ENST00000464286 SYNGR3O43761 229 aa6.14□□□□□ -1.43
CLSTN1-204ENST00000464286 ANGPTL7O43827 346 aa6.14□□□□□ -1.43
CLSTN1-204ENST00000464286 TNFSF13O75888 250 aa6.14□□□□□ -1.43
CLSTN1-204ENST00000464286 MT-CO2P00403 227 aa6.14□□□□□ -1.43
CLSTN1-204ENST00000464286 KRASP01116 189 aa6.14□□□□□ -1.43
CLSTN1-204ENST00000464286 ESDP10768 282 aa6.14□□□□□ -1.43
CLSTN1-204ENST00000464286 CD38P28907 300 aa6.14□□□□□ -1.43
CLSTN1-204ENST00000464286 ASCL1P50553 236 aa6.14□□□□□ -1.43
CLSTN1-204ENST00000464286 DSCR4P56555 118 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms