RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 DUX4L7P0CJ90 424 aa10.71□□□□□ -0.69
VAPB-203ENST00000463370 RPL12P30050 165 aaKnown RBP10.71□□□□□ -0.69
VAPB-203ENST00000463370 CFHR2P36980 270 aa10.71□□□□□ -0.69
VAPB-203ENST00000463370 RPS23P62266 143 aaKnown RBP10.71□□□□□ -0.69
VAPB-203ENST00000463370 AANATQ16613 207 aa10.71□□□□□ -0.69
VAPB-203ENST00000463370 IZUMO4Q1ZYL8 232 aa10.71□□□□□ -0.69
VAPB-203ENST00000463370 NMSQ5H8A3 153 aa10.71□□□□□ -0.69
VAPB-203ENST00000463370 ADAM5Q6NVV9 412 aa10.71□□□□□ -0.69
VAPB-203ENST00000463370 DUX4L9Q6RFH8 374 aaPredicted RBP10.71□□□□□ -0.69
VAPB-203ENST00000463370 NUP37Q8NFH4 326 aa10.71□□□□□ -0.69
VAPB-203ENST00000463370 STOML3Q8TAV4 291 aa10.71□□□□□ -0.69
VAPB-203ENST00000463370 ERGIC1Q969X5 290 aa10.71□□□□□ -0.69
VAPB-203ENST00000463370 OR2S2Q9NQN1 319 aa10.71□□□□□ -0.69
VAPB-203ENST00000463370 DUX4Q9UBX2 424 aa10.71□□□□□ -0.69
VAPB-203ENST00000463370 RCL1Q9Y2P8 373 aaKnown RBP10.71□□□□□ -0.69
VAPB-203ENST00000463370 RBM7Q9Y580 266 aaKnown RBP10.71□□□□□ -0.69
VAPB-203ENST00000463370 IGHV3-43A0A0B4J1X8 118 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 NXPH3O95157 252 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 CYB5R3P00387 301 aaPredicted RBP10.7□□□□□ -0.7
VAPB-203ENST00000463370 IGHV3-43DP0DP04 118 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 PTAFRP25105 342 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 CD80P33681 288 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 PPP1CCP36873 323 aaKnown RBP10.7□□□□□ -0.7
VAPB-203ENST00000463370 NUP62P37198 522 aaPredicted RBP10.7□□□□□ -0.7
VAPB-203ENST00000463370 ADIPOQQ15848 244 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 RPL7L1Q6DKI1 246 aaKnown RBP10.7□□□□□ -0.7
VAPB-203ENST00000463370 DMBX1Q8NFW5 382 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 OR10Z1Q8NGY1 313 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 RBPMSQ93062 196 aaKnown RBP10.7□□□□□ -0.7
VAPB-203ENST00000463370 GALMQ96C23 342 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 SMIM3Q9BZL3 60 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 DNTTIP1Q9H147 329 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 KCNIP1Q9NZI2 227 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 OOEPA6NGQ2 149 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 IGKV1-39P01597 117 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 IGKV1D-39P04432 117 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 OR4A8P0C604 315 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 SRPXP78539 464 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 TNFAIP6P98066 277 aaPredicted RBP10.7□□□□□ -0.7
VAPB-203ENST00000463370 RBPJQ06330 500 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 SMCO1Q147U7 214 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 CXorf66Q5JRM2 361 aaPredicted RBP10.7□□□□□ -0.7
VAPB-203ENST00000463370 PDZD9Q8IXQ8 264 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 DRAM1Q8N682 238 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 OR5D13Q8NGL4 314 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 VKORC1Q9BQB6 163 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 BARX1Q9HBU1 254 aaPredicted RBP10.7□□□□□ -0.7
VAPB-203ENST00000463370 SDHAF2Q9NX18 166 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 ROS1P08922 2347 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 KIAA2026Q5HYC2 2103 aa10.7□□□□□ -0.7
VAPB-203ENST00000463370 MFSD2BA6NFX1 497 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 I3L521 148 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 IL2RGP31785 369 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 GATA4P43694 442 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 TMEM33P57088 247 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 POLR2GP62487 172 aaKnown RBP eCLIP10.69□□□□□ -0.7
VAPB-203ENST00000463370 BAP18Q8IXM2 172 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 TMED6Q8WW62 240 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 MAGT1Q9H0U3 335 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 ZC4H2Q9NQZ6 224 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 FBXL17Q9UF56 701 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 DEFB108AA8MXU0 73 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 C15orf65H3BRN8 121 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 TPT1P13693 172 aaKnown RBP10.69□□□□□ -0.7
VAPB-203ENST00000463370 SELENOVP59797 346 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 CCL8P80075 99 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 LTC4SQ16873 150 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 ANGPTL6Q8NI99 470 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 NEUROG1Q92886 237 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 ARL11Q969Q4 196 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 PHYHIPLQ96FC7 376 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 PLPPR2Q96GM1 343 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 SLC25A32Q9H2D1 315 aa10.69□□□□□ -0.7
VAPB-203ENST00000463370 POLEQ07864 2286 aa10.68□□□□□ -0.7
VAPB-203ENST00000463370 E5RGE8 158 aa10.68□□□□□ -0.7
VAPB-203ENST00000463370 ST8SIA3O43173 380 aa10.68□□□□□ -0.7
VAPB-203ENST00000463370 ZNF16P17020 682 aaPredicted RBP10.68□□□□□ -0.7
VAPB-203ENST00000463370 VDAC1P21796 283 aa10.68□□□□□ -0.7
VAPB-203ENST00000463370 LINC00205P59089 165 aa10.68□□□□□ -0.7
VAPB-203ENST00000463370 ZNF585BQ52M93 769 aa10.68□□□□□ -0.7
VAPB-203ENST00000463370 Q6ZRM9 215 aa10.68□□□□□ -0.7
VAPB-203ENST00000463370 ZNF808Q8N4W9 903 aaPredicted RBP10.68□□□□□ -0.7
VAPB-203ENST00000463370 KDF1Q8NAX2 398 aaPredicted RBP10.68□□□□□ -0.7
VAPB-203ENST00000463370 DEFB108BQ8NET1 73 aa10.68□□□□□ -0.7
VAPB-203ENST00000463370 OR2D2Q9H210 308 aa10.68□□□□□ -0.7
VAPB-203ENST00000463370 C11orf1Q9H5F2 150 aa10.68□□□□□ -0.7
VAPB-203ENST00000463370 IL19Q9UHD0 177 aa10.68□□□□□ -0.7
VAPB-203ENST00000463370 NSG2Q9Y328 171 aa10.68□□□□□ -0.7
VAPB-203ENST00000463370 POMT1Q9Y6A1 747 aa10.68□□□□□ -0.7
VAPB-203ENST00000463370 GRNP28799 593 aaKnown RBP10.68□□□□□ -0.7
VAPB-203ENST00000463370 P2RX3P56373 397 aa10.68□□□□□ -0.7
VAPB-203ENST00000463370 CDSNQ15517 529 aa10.68□□□□□ -0.7
VAPB-203ENST00000463370 UTF1Q5T230 341 aa10.68□□□□□ -0.7
VAPB-203ENST00000463370 WFDC1Q9HC57 220 aa10.68□□□□□ -0.7
VAPB-203ENST00000463370 ODAMA1E959 279 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 LGALS8O00214 317 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 TMEM50AO95807 157 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 SERPINE2P07093 398 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 EPHA1P21709 976 aa10.67□□□□□ -0.7
VAPB-203ENST00000463370 NKX2-1P43699 371 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms