RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 A0A1B0GX30 115 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 NAP1L6A6NFF2 107 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 BET1O15155 118 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 LYRM1O43325 122 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 YPEL1O60688 119 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 IGHV1-8P0DP01 117 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 MMP9P14780 707 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 ZBTB25P24278 435 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 INPP1P49441 399 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 ARF6P62330 175 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 GNMTQ14749 295 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 TMEM249Q2WGJ8 235 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 MORN2Q502X0 79 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 PRAMEF5Q5TYX0 476 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 LHFPL1Q86WI0 220 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 LDLRAD3Q86YD5 345 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 PRR18Q8N4B5 295 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 LINC01356Q8N9X3 169 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 TNFRSF14Q92956 283 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 MRGPRFQ96AM1 343 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 MSI2Q96DH6 328 aaKnown RBP11.75□□□□□ -0.53
COL6A1-202ENST00000463060 YPEL2Q96QA6 119 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 EHFQ9NZC4 300 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 JPT1Q9UK76 154 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 OTOGQ6ZRI0 2925 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 ZANQ9Y493 2812 aa11.74□□□□□ -0.53
COL6A1-202ENST00000463060 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.74□□□□□ -0.53
COL6A1-202ENST00000463060 PRTN3P24158 256 aa11.74□□□□□ -0.53
COL6A1-202ENST00000463060 SLC6A1P30531 599 aa11.74□□□□□ -0.53
COL6A1-202ENST00000463060 FCGR2CP31995 323 aa11.74□□□□□ -0.53
COL6A1-202ENST00000463060 DVL1P1P54792 670 aaPredicted RBP11.74□□□□□ -0.53
COL6A1-202ENST00000463060 AADACL3Q5VUY0 350 aa11.74□□□□□ -0.53
COL6A1-202ENST00000463060 ZNF439Q8NDP4 499 aa11.74□□□□□ -0.53
COL6A1-202ENST00000463060 OR51S1Q8NGJ8 323 aa11.74□□□□□ -0.53
COL6A1-202ENST00000463060 OR10J5Q8NHC4 309 aa11.74□□□□□ -0.53
COL6A1-202ENST00000463060 ZNF596Q8TC21 504 aa11.74□□□□□ -0.53
COL6A1-202ENST00000463060 IL1F10Q8WWZ1 152 aa11.74□□□□□ -0.53
COL6A1-202ENST00000463060 PARP12Q9H0J9 701 aaKnown RBP11.74□□□□□ -0.53
COL6A1-202ENST00000463060 LPAR2Q9HBW0 351 aa11.74□□□□□ -0.53
COL6A1-202ENST00000463060 OR2S2Q9NQN1 319 aa11.74□□□□□ -0.53
COL6A1-202ENST00000463060 SLC23A1Q9UHI7 598 aa11.74□□□□□ -0.53
COL6A1-202ENST00000463060 IGHV3-43A0A0B4J1X8 118 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 TRAV20A0A0B4J274 112 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 ITGB1BP1O14713 200 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 AMY2AP04746 511 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 IGHV3-43DP0DP04 118 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 NFYAP23511 347 aaPredicted RBP11.73□□□□□ -0.53
COL6A1-202ENST00000463060 CD34P28906 385 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 FAUP35544 74 aaKnown RBP11.73□□□□□ -0.53
COL6A1-202ENST00000463060 PPP1CCP36873 323 aaKnown RBP11.73□□□□□ -0.53
COL6A1-202ENST00000463060 CEACAM6P40199 344 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 GZMKP49863 264 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 ZNF134P52741 427 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 Q3ZCU0 254 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 PLA1AQ53H76 456 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 HCP5Q6MZN7 132 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 C8orf31Q8N9H6 132 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 OR13C8Q8NGS7 320 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 OR6F1Q8NGZ6 308 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 TERB2Q8NHR7 220 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 ZNF469Q96JG9 3925 aaPredicted RBP11.73□□□□□ -0.53
COL6A1-202ENST00000463060 AGMATQ9BSE5 352 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 TMPRSS13Q9BYE2 586 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 METTL8Q9H825 291 aaKnown RBP11.73□□□□□ -0.53
COL6A1-202ENST00000463060 RDH8Q9NYR8 311 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 ONECUT1Q9UBC0 465 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 ITGB1BP2Q9UKP3 347 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 WNK2Q9Y3S1 2297 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 SESN1Q9Y6P5 492 aa11.73□□□□□ -0.53
COL6A1-202ENST00000463060 CREBBPQ92793 2442 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 OR5H14A6NHG9 310 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 CENPXA8MT69 81 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 DISC1C4P0D8 188 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 IFNA6P05013 189 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 AADACP22760 399 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 GATA3P23771 443 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 DLX1P56177 255 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 LTC4SQ16873 150 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 CT45A1Q5HYN5 189 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 POC5Q8NA72 575 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 DUSP18Q8NEJ0 188 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 CT45A3Q8NHU0 189 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 TMEM186Q96B77 213 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 MOB3AQ96BX8 217 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 TBX15Q96SF7 602 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 PRRT1Q99946 306 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 ZNF2Q9BSG1 426 aaPredicted RBP11.72□□□□□ -0.53
COL6A1-202ENST00000463060 TMEM133Q9H2Q1 129 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 HIF1ANQ9NWT6 349 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 ZNF69Q9UC07 566 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 OR2W1Q9Y3N9 320 aa11.72□□□□□ -0.53
COL6A1-202ENST00000463060 IGKV1D-13A0A0B4J2D9 117 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 hCG_1809904A0A1W2PP81 198 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 A0A1W2PPE2 198 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 A0A1W2PR64 198 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 A0A1W2PRV1 198 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 PPYP01298 95 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 IGKV1-13P0DP09 117 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 NFYBP25208 207 aa11.71□□□□□ -0.53
COL6A1-202ENST00000463060 CCR6P51684 374 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms