RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 ACACBO00763 2458 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 HEXAP06865 529 aa12.17□□□□□ -0.46
HDAC6-213ENST00000462730 EGR1P18146 543 aa12.17□□□□□ -0.46
HDAC6-213ENST00000462730 HFEQ30201 348 aa12.17□□□□□ -0.46
HDAC6-213ENST00000462730 SPRNQ5BIV9 151 aa12.17□□□□□ -0.46
HDAC6-213ENST00000462730 C10orf91Q5T1B1 145 aa12.17□□□□□ -0.46
HDAC6-213ENST00000462730 DHRS7BQ6IAN0 325 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-213ENST00000462730 NUP37Q8NFH4 326 aa12.17□□□□□ -0.46
HDAC6-213ENST00000462730 OR10J5Q8NHC4 309 aa12.17□□□□□ -0.46
HDAC6-213ENST00000462730 PRR7Q8TB68 274 aa12.17□□□□□ -0.46
HDAC6-213ENST00000462730 SUCNR1Q9BXA5 334 aa12.17□□□□□ -0.46
HDAC6-213ENST00000462730 SAV1Q9H4B6 383 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-213ENST00000462730 TMEM30CPA0ZSE6 113 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 F8W036 122 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 LMO1P25800 156 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 GNRHRP30968 328 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 CDSNQ15517 529 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 GUCA2BQ16661 112 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 FBXL19-AS1Q494R0 122 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 MOGAT3Q86VF5 341 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 BAP18Q8IXM2 172 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 FAM185AQ8N0U4 392 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 ITLN1Q8WWA0 313 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 IL1F10Q8WWZ1 152 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 MRPL24Q96A35 216 aaKnown RBP12.16□□□□□ -0.46
HDAC6-213ENST00000462730 WIPI2Q9Y4P8 454 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 NBASA2RRP1 2371 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 KALRNO60229 2985 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 PHF1O43189 567 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-213ENST00000462730 SNAPINO95295 136 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 IFNA21P01568 189 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 GRNP28799 593 aaKnown RBP12.16□□□□□ -0.46
HDAC6-213ENST00000462730 KCNJ3P48549 501 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 RAB13P51153 203 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 COL10A1Q03692 680 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 GGNBP1Q5YKI7 109 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 TMEM88Q6PEY1 159 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 LIAT1Q6ZQX7 453 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 ZNF818PQ6ZRF7 136 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 LDLRAD3Q86YD5 345 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 H1FOOQ8IZA3 346 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-213ENST00000462730 PRR18Q8N4B5 295 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 UBALD1Q8TB05 177 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 RNF141Q8WVD5 230 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 RNASE6Q93091 150 aaKnown RBP12.16□□□□□ -0.46
HDAC6-213ENST00000462730 ARL11Q969Q4 196 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 RRNAD1Q96FB5 475 aaKnown RBP12.16□□□□□ -0.46
HDAC6-213ENST00000462730 RNF126Q9BV68 326 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 OR1A1Q9P1Q5 309 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 METRNQ9UJH8 293 aa12.16□□□□□ -0.46
HDAC6-213ENST00000462730 SRRM5B3KS81 715 aa12.15□□□□□ -0.46
HDAC6-213ENST00000462730 HSD17B6O14756 317 aa12.15□□□□□ -0.46
HDAC6-213ENST00000462730 MPPED1O15442 326 aa12.15□□□□□ -0.46
HDAC6-213ENST00000462730 PVALBP20472 110 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-213ENST00000462730 PAX6P26367 422 aa12.15□□□□□ -0.46
HDAC6-213ENST00000462730 OR3A1P47881 315 aa12.15□□□□□ -0.46
HDAC6-213ENST00000462730 RND3P61587 244 aa12.15□□□□□ -0.46
HDAC6-213ENST00000462730 HMGN3Q15651 99 aa12.15□□□□□ -0.46
HDAC6-213ENST00000462730 ADAM5Q6NVV9 412 aa12.15□□□□□ -0.46
HDAC6-213ENST00000462730 CA5BP1Q8WTZ4 195 aa12.15□□□□□ -0.46
HDAC6-213ENST00000462730 NGBQ9NPG2 151 aa12.15□□□□□ -0.46
HDAC6-213ENST00000462730 CCL28Q9NRJ3 127 aa12.15□□□□□ -0.46
HDAC6-213ENST00000462730 CYTL1Q9NRR1 136 aa12.15□□□□□ -0.46
HDAC6-213ENST00000462730 MBNL3Q9NUK0 354 aaKnown RBP12.15□□□□□ -0.46
HDAC6-213ENST00000462730 GSKIPQ9P0R6 139 aa12.15□□□□□ -0.46
HDAC6-213ENST00000462730 CHD3Q12873 2000 aaKnown RBP12.15□□□□□ -0.47
HDAC6-213ENST00000462730 NPIPB11E5RHQ5 1161 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 IFNL4K9M1U5 179 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 IAH1Q2TAA2 248 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-213ENST00000462730 SLC35E4Q6ICL7 350 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 IL34Q6ZMJ4 242 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 TBC1D26Q86UD7 250 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 FAM219AQ8IW50 185 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 CD177Q8N6Q3 437 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 TMED6Q8WW62 240 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 TP53RKQ96S44 253 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 TAF9BQ9HBM6 251 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 DNAJB11Q9UBS4 358 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 OR2W1Q9Y3N9 320 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 C3orf85A0A1B0GTC6 90 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 H0YIZ8 118 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-213ENST00000462730 IGHV1-46P01743 117 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 S100A8P05109 93 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 TNFAIP6P98066 277 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-213ENST00000462730 AESQ08117 197 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 LGI3Q8N145 548 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 GLYATL2Q8WU03 294 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 MSI2Q96DH6 328 aaKnown RBP12.14□□□□□ -0.47
HDAC6-213ENST00000462730 COQ2Q96H96 371 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 C12orf57Q99622 126 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 COA4Q9NYJ1 87 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 KCNIP1Q9NZI2 227 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 PLCE1Q9P212 2302 aa12.14□□□□□ -0.47
HDAC6-213ENST00000462730 IGHV3OR15-7A0A075B7D8 119 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 HSPA12AO43301 675 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 PSG2P11465 335 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 PRDX2P32119 198 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 CFHR2P36980 270 aa12.13□□□□□ -0.47
HDAC6-213ENST00000462730 UQCRFS1P47985 274 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms