RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 RPL31P62899 125 aaKnown RBP12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 SURF2Q15527 256 aaPredicted RBP12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 CR1LQ2VPA4 569 aa12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 DACT3Q96B18 629 aaPredicted RBP12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 UPRTQ96BW1 309 aa12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 GAL3ST2Q9H3Q3 398 aa12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 YAE1D1Q9NRH1 226 aa12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 TMEM160Q9NX00 188 aa12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 CTSZQ9UBR2 303 aa12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 CLN8Q9UBY8 286 aa12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 ZNF69Q9UC07 566 aa12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 SLC23A1Q9UHI7 598 aa12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 UBE2J1Q9Y385 318 aaPredicted RBP12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 LINC00312Q9Y6C7 94 aa12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 A0A1W2PPH5 198 aa12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 ZNF729A6NN14 1252 aaPredicted RBP12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 NPIPB11E5RHQ5 1161 aa12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 PRAF2O60831 178 aa12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 NFYAP23511 347 aaPredicted RBP12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 FPR2P25090 351 aa12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 RAB25P57735 213 aa12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 TMEM30BQ3MIR4 351 aa12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 CYB5R2Q6BCY4 276 aa12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 LPCAT3Q6P1A2 487 aa12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 LHFPL1Q86WI0 220 aa12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 FAM185AQ8N0U4 392 aa12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 OR13C8Q8NGS7 320 aa12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 OR1L1Q8NH94 360 aa12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 ZFAND1Q8TCF1 268 aa12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 MARCH1Q8TCQ1 289 aa12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 CORO2AQ92828 525 aa12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 PIMREGQ9BSJ6 248 aa12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 PATZ1Q9HBE1 687 aaKnown RBP12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 GPN1Q9HCN4 374 aaPredicted RBP12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 TAS2R3Q9NYW6 316 aa12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 CALYQ9NYX4 217 aa12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 C14orf166Q9Y224 244 aaKnown RBP12.55□□□□□ -0.4
TMEM39A-203ENST00000461654 TLN2Q9Y4G6 2542 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 IGKV1-6A0A0C4DH72 117 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 KBTBD11-OT1A0A1B0GTJ5 212 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 PPYP01298 95 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 WNT2P09544 360 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 ZNF728P0DKX0 622 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 SSTR5P35346 364 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 TAS2R31P59538 309 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 FXYD4P59646 89 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 GNB2P62879 340 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 HTD2P86397 168 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 HERPUD1Q15011 391 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 ESCO2Q56NI9 601 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 TMED4Q7Z7H5 227 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 UBALD1Q8TB05 177 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 TOMM40LQ969M1 308 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 MOB3AQ96BX8 217 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 DCTN5Q9BTE1 182 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 TMPRSS13Q9BYE2 586 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 NARFLQ9H6Q4 476 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 OR2S2Q9NQN1 319 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 FLVCR2Q9UPI3 526 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 ABCA1O95477 2261 aa12.54□□□□□ -0.4
TMEM39A-203ENST00000461654 A0A1B0GVG6 124 aa12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 OR5H14A6NHG9 310 aa12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 RGS11O94810 467 aa12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 IGHV4-31P0DP07 118 aa12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 AADACP22760 399 aa12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 CEACAM6P40199 344 aa12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 GZMKP49863 264 aa12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 TATDN3Q17R31 274 aa12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 ABCA11PQ4W5N1 156 aa12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 AADACL3Q5VUY0 350 aa12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 CD276Q5ZPR3 534 aa12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 ZNF660Q6AZW8 331 aaPredicted RBP12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 C11orf88Q6PI97 169 aa12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 H1FOOQ8IZA3 346 aaPredicted RBP12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 RFESDQ8TAC1 157 aa12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 RAB39BQ96DA2 213 aa12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 ZNF714Q96N38 554 aa12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 GNG12Q9UBI6 72 aa12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 JPT1Q9UK76 154 aa12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 OR2W1Q9Y3N9 320 aa12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 RBM7Q9Y580 266 aaKnown RBP12.53□□□□□ -0.4
TMEM39A-203ENST00000461654 MEX3AA1L020 520 aaKnown RBP12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 KIAA1324LA8MWY0 1029 aaPredicted RBP12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 C15orf65H3BRN8 121 aa12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 ANXA7P20073 488 aaKnown RBP12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 S100GP29377 79 aa12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 LUMP51884 338 aaPredicted RBP12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 UCP3P55916 312 aa12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 C11orf91Q3C1V1 193 aa12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 C4orf46Q504U0 113 aa12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 METTL11BQ5VVY1 283 aa12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 WDR25Q64LD2 544 aaPredicted RBP12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 TMEM200BQ69YZ2 307 aa12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 C5orf24Q7Z6I8 188 aa12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 SLC38A6Q8IZM9 456 aa12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 FGFRL1Q8N441 504 aa12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 OR10A7Q8NGE5 316 aa12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 OR52L2PQ8NGH6 319 aa12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 SSBP3Q9BWW4 388 aaPredicted RBP12.52□□□□□ -0.41
TMEM39A-203ENST00000461654 BEX2Q9BXY8 128 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms