RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 KCNS2Q9ULS6 477 aa16.96■□□□□ 0.31
CCM2-203ENST00000461377 PPP1R3CQ9UQK1 317 aa16.96■□□□□ 0.31
CCM2-203ENST00000461377 ZNF835Q9Y2P0 537 aa16.96■□□□□ 0.31
CCM2-203ENST00000461377 RAB19A4D1S5 217 aa16.95■□□□□ 0.3
CCM2-203ENST00000461377 HBZP02008 142 aa16.95■□□□□ 0.3
CCM2-203ENST00000461377 PRDX2P32119 198 aa16.95■□□□□ 0.3
CCM2-203ENST00000461377 CXorf66Q5JRM2 361 aaPredicted RBP16.95■□□□□ 0.3
CCM2-203ENST00000461377 KRBOX4Q5JUW0 171 aa16.95■□□□□ 0.3
CCM2-203ENST00000461377 SLC25A6P12236 298 aa16.95■□□□□ 0.3
CCM2-203ENST00000461377 PVALBP20472 110 aaPredicted RBP16.95■□□□□ 0.3
CCM2-203ENST00000461377 CD40P25942 277 aa16.95■□□□□ 0.3
CCM2-203ENST00000461377 IL2RGP31785 369 aa16.95■□□□□ 0.3
CCM2-203ENST00000461377 MST1LQ2TV78 715 aa16.95■□□□□ 0.3
CCM2-203ENST00000461377 SPRNQ5BIV9 151 aa16.95■□□□□ 0.3
CCM2-203ENST00000461377 OR2C3Q8N628 320 aa16.95■□□□□ 0.3
CCM2-203ENST00000461377 DRAM1Q8N682 238 aa16.95■□□□□ 0.3
CCM2-203ENST00000461377 MRGPRDQ8TDS7 321 aa16.95■□□□□ 0.3
CCM2-203ENST00000461377 SAT2Q96F10 170 aaPredicted RBP16.95■□□□□ 0.3
CCM2-203ENST00000461377 SMIM8Q96KF7 97 aa16.95■□□□□ 0.3
CCM2-203ENST00000461377 ELOVL5Q9NYP7 299 aa16.95■□□□□ 0.3
CCM2-203ENST00000461377 MSRB2Q9Y3D2 182 aa16.95■□□□□ 0.3
CCM2-203ENST00000461377 MGAQ8IWI9 3026 aa16.94■□□□□ 0.3
CCM2-203ENST00000461377 A0A0G2JRQ6 117 aa16.94■□□□□ 0.3
CCM2-203ENST00000461377 ZNF705EA8MWA4 302 aaPredicted RBP16.94■□□□□ 0.3
CCM2-203ENST00000461377 ZNF737O75373 536 aa16.94■□□□□ 0.3
CCM2-203ENST00000461377 IGKV1-39P01597 117 aa16.94■□□□□ 0.3
CCM2-203ENST00000461377 IGKV1D-39P04432 117 aa16.94■□□□□ 0.3
CCM2-203ENST00000461377 GLIPR1P48060 266 aa16.94■□□□□ 0.3
CCM2-203ENST00000461377 SULT1A2P50226 295 aa16.94■□□□□ 0.3
CCM2-203ENST00000461377 EWSR1Q01844 656 aaKnown RBP eCLIP16.94■□□□□ 0.3
CCM2-203ENST00000461377 UQCC3Q6UW78 93 aa16.94■□□□□ 0.3
CCM2-203ENST00000461377 GCSAMQ8N6F7 178 aa16.94■□□□□ 0.3
CCM2-203ENST00000461377 GPR146Q96CH1 333 aa16.94■□□□□ 0.3
CCM2-203ENST00000461377 LURAP1Q96LR2 239 aa16.94■□□□□ 0.3
CCM2-203ENST00000461377 MRPL37Q9BZE1 423 aaKnown RBP16.94■□□□□ 0.3
CCM2-203ENST00000461377 LIN7CQ9NUP9 197 aaKnown RBP16.94■□□□□ 0.3
CCM2-203ENST00000461377 PLA2G2EQ9NZK7 142 aa16.94■□□□□ 0.3
CCM2-203ENST00000461377 IGKV1D-17A0A075B6S4 117 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 SSSCA1O60232 199 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 PITX3O75364 302 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 MMP9P14780 707 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 NHLH2Q02577 135 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 STPG2Q8N412 459 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 OR52L2PQ8NGH6 319 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 ARL11Q969Q4 196 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 PLEKHF2Q9H8W4 249 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 ARID1AO14497 2285 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 BORCS7-ASMTA0A0B4J1R7 106 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 A0A1B0GU03 582 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 FAM24AA6NFZ4 105 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 NUDT19A8MXV4 375 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 SPRY3O43610 288 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 MOGAT3Q86VF5 341 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 ZNF645Q8N7E2 425 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 ZBTB34Q8NCN2 500 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 OR13A1Q8NGR1 328 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 LSM10Q969L4 123 aaKnown RBP16.93■□□□□ 0.3
CCM2-203ENST00000461377 SNRNP40Q96DI7 357 aaKnown RBP16.93■□□□□ 0.3
CCM2-203ENST00000461377 MAGT1Q9H0U3 335 aa16.93■□□□□ 0.3
CCM2-203ENST00000461377 LYRM2Q9NU23 88 aaPredicted RBP16.93■□□□□ 0.3
CCM2-203ENST00000461377 ANKRD11Q6UB99 2663 aaPredicted RBP16.93■□□□□ 0.3
CCM2-203ENST00000461377 PTPRZ1P23471 2315 aaPredicted RBP16.92■□□□□ 0.3
CCM2-203ENST00000461377 FBXO24O75426 580 aa16.92■□□□□ 0.3
CCM2-203ENST00000461377 ZNF585BQ52M93 769 aa16.92■□□□□ 0.3
CCM2-203ENST00000461377 TPRX1Q8N7U7 411 aa16.92■□□□□ 0.3
CCM2-203ENST00000461377 BOLLQ8N9W6 283 aaKnown RBP16.92■□□□□ 0.3
CCM2-203ENST00000461377 BPIFCQ8NFQ6 507 aa16.92■□□□□ 0.3
CCM2-203ENST00000461377 ITLN1Q8WWA0 313 aa16.92■□□□□ 0.3
CCM2-203ENST00000461377 GINS3Q9BRX5 216 aa16.92■□□□□ 0.3
CCM2-203ENST00000461377 MMP26Q9NRE1 261 aa16.92■□□□□ 0.3
CCM2-203ENST00000461377 JKAMPQ9P055 326 aa16.92■□□□□ 0.3
CCM2-203ENST00000461377 APC2O95996 2303 aa16.92■□□□□ 0.3
CCM2-203ENST00000461377 DSPP15924 2871 aaKnown RBP16.92■□□□□ 0.3
CCM2-203ENST00000461377 BOD1L1Q8NFC6 3051 aa16.92■□□□□ 0.3
CCM2-203ENST00000461377 IGSF23A1L1A6 192 aa16.91■□□□□ 0.3
CCM2-203ENST00000461377 RNF212BA8MTL3 300 aa16.91■□□□□ 0.3
CCM2-203ENST00000461377 C16orf97H3BN30 126 aa16.91■□□□□ 0.3
CCM2-203ENST00000461377 LHBP01229 141 aa16.91■□□□□ 0.3
CCM2-203ENST00000461377 GATA4P43694 442 aa16.91■□□□□ 0.3
CCM2-203ENST00000461377 PRR30Q53SZ7 412 aaPredicted RBP16.91■□□□□ 0.3
CCM2-203ENST00000461377 TRAT1Q6PIZ9 186 aa16.91■□□□□ 0.3
CCM2-203ENST00000461377 NUP37Q8NFH4 326 aa16.91■□□□□ 0.3
CCM2-203ENST00000461377 HEATR1Q9H583 2144 aaKnown RBP16.91■□□□□ 0.3
CCM2-203ENST00000461377 MED6O75586 246 aa16.91■□□□□ 0.3
CCM2-203ENST00000461377 SELENOVP59797 346 aa16.91■□□□□ 0.3
CCM2-203ENST00000461377 VAMP2P63027 116 aa16.91■□□□□ 0.3
CCM2-203ENST00000461377 NHLH1Q02575 133 aa16.91■□□□□ 0.3
CCM2-203ENST00000461377 MSMO1Q15800 293 aa16.91■□□□□ 0.3
CCM2-203ENST00000461377 PXDC1Q5TGL8 231 aa16.91■□□□□ 0.3
CCM2-203ENST00000461377 FAM53AQ6NSI3 398 aaPredicted RBP16.91■□□□□ 0.3
CCM2-203ENST00000461377 RNF115Q9Y4L5 304 aa16.91■□□□□ 0.3
CCM2-203ENST00000461377 TMEM50AO95807 157 aa16.9■□□□□ 0.3
CCM2-203ENST00000461377 SEC11BP0C7V7 166 aa16.9■□□□□ 0.3
CCM2-203ENST00000461377 EPHA1P21709 976 aa16.9■□□□□ 0.3
CCM2-203ENST00000461377 SSTR5P35346 364 aa16.9■□□□□ 0.3
CCM2-203ENST00000461377 LPAR6P43657 344 aa16.9■□□□□ 0.3
CCM2-203ENST00000461377 CAV2P51636 162 aa16.9■□□□□ 0.3
CCM2-203ENST00000461377 EIF4EBP1Q13541 118 aaPredicted RBP16.9■□□□□ 0.3
CCM2-203ENST00000461377 IL34Q6ZMJ4 242 aa16.9■□□□□ 0.3
CCM2-203ENST00000461377 TMEM252Q8N6L7 170 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms