RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 Q6ZS52 159 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 HOGA1Q86XE5 327 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 ARL6IP6Q8N6S5 226 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 OR2Y1Q8NGV0 311 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 SOSTQ9BQB4 213 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 PXMP4Q9Y6I8 212 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 HINT1P49773 126 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-205ENST00000461221 SLC25A34Q6PIV7 304 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 C10orf126Q8N4M7 172 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 CHST5Q9GZS9 411 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 SSC5DA1L4H1 1573 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 TCRBV16S1A1N1A0A5B0 115 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 DLL1O00548 723 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 LEPROTL1O95214 131 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 NUP37Q8NFH4 326 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 OR10S1Q8NGN2 331 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 TMEM45BQ96B21 275 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 MYEOVQ96EZ4 313 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 ZNF714Q96N38 554 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 ZNF71Q9NQZ8 489 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-205ENST00000461221 WIPI2Q9Y4P8 454 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 NWD2Q9ULI1 1742 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 C9orf172C9J069 976 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 C16orf97H3BN30 126 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 IGF2P01344 180 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 TSPOP30536 169 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 NPBWR2P48146 333 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 GFRA1P56159 465 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 ZIC1Q15915 447 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 C2orf83Q53S99 150 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 SPINK14Q6IE38 97 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 GUCD1Q96NT3 240 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 TREM2Q9NZC2 230 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 A0A0B4J293 547 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 AGFG2O95081 481 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 PRSS2P07478 247 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 PRF1P14222 555 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 OR10AC1Q8NH08 325 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 HMGCLL1Q8TB92 370 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 MBD1Q9UIS9 605 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-205ENST00000461221 PHLDA3Q9Y5J5 127 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 ANKRD36CQ5JPF3 1778 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 TRAV30A0A087WSZ9 112 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 IFNL4K9M1U5 179 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 CFDP00746 253 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-205ENST00000461221 COL10A1Q03692 680 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 ZNF658BQ4V348 819 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-205ENST00000461221 MSRB3Q8IXL7 192 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 OR52M1Q8NGK5 317 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 RASL10BQ96S79 203 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 ALKBH7Q9BT30 221 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-205ENST00000461221 UBR2Q8IWV8 1755 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 TRGC1P0CF51 173 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 NAT2P11245 290 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 ANOS1P23352 680 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 MAGEA5P43359 124 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 RPL31P62899 125 aaKnown RBP7.85□□□□□ -1.15
BRCA1-205ENST00000461221 KIAA0040Q15053 153 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 ADAD2Q8NCV1 583 aaKnown RBP7.85□□□□□ -1.15
BRCA1-205ENST00000461221 OR1K1Q8NGR3 316 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 PRR7Q8TB68 274 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 PCGF1Q9BSM1 259 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 V9GYH0 126 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 CDC42EP2O14613 210 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 FOLR2P14207 255 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 PRDX2P32119 198 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 DLX6P56179 175 aa7.85□□□□□ -1.15
BRCA1-205ENST00000461221 GEMIN7Q9H840 131 aaKnown RBP7.85□□□□□ -1.15
BRCA1-205ENST00000461221 HLA-DRB1P01911 266 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 IL4P05112 153 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 PIGYQ3MUY2 71 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 CBLN3Q6UW01 205 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 TCF24Q7RTU0 167 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 RNF133Q8WVZ7 376 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 PRELID3AQ96N28 172 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 CRYBG1Q9Y4K1 1723 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 IGHV3OR15-7A0A075B7D8 119 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 IGHV3-21A0A0B4J1V1 117 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 HSPB1P04792 205 aaKnown RBP7.84□□□□□ -1.15
BRCA1-205ENST00000461221 APELAP0DMC3 54 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 RBM11P57052 281 aaKnown RBP7.84□□□□□ -1.15
BRCA1-205ENST00000461221 SMUG1Q53HV7 270 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 PRSS41Q7RTY9 318 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 SHISA5Q8N114 240 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 LINC01555Q8NAE3 123 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 H0Y980 276 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 CT62P0C5K7 136 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 NUBP1P53384 320 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 CX3CL1P78423 397 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 GCSAMLQ5JQS6 135 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 BEND2Q8NDZ0 799 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 OR10AG1Q8NH19 301 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 LHFPL5Q8TAF8 219 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 ZNF430Q9H8G1 570 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-205ENST00000461221 TUBD1Q9UJT1 453 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 SOX21Q9Y651 276 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-205ENST00000461221 MGST3O14880 152 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 TFPI2P48307 235 aa7.84□□□□□ -1.15
BRCA1-205ENST00000461221 MEF2CQ06413 473 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-205ENST00000461221 FAM106AQ4KMX7 169 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms