RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 RTBDNQ9BSG5 229 aaPredicted RBP2.36□□□□□ -2.03
SPTLC1-203ENST00000461132 OR51I1Q9H343 314 aa2.36□□□□□ -2.03
SPTLC1-203ENST00000461132 ZNF331Q9NQX6 463 aaPredicted RBP2.36□□□□□ -2.03
SPTLC1-203ENST00000461132 FBXO5Q9UKT4 447 aa2.36□□□□□ -2.03
SPTLC1-203ENST00000461132 RAB26Q9ULW5 256 aa2.36□□□□□ -2.03
SPTLC1-203ENST00000461132 YTHDF2Q9Y5A9 579 aaKnown RBP2.36□□□□□ -2.03
SPTLC1-203ENST00000461132 GPATCH8Q9UKJ3 1502 aaKnown RBP2.36□□□□□ -2.03
SPTLC1-203ENST00000461132 ZBED9Q6R2W3 1325 aa2.36□□□□□ -2.03
SPTLC1-203ENST00000461132 SNAPC4Q5SXM2 1469 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 VGLL3A8MV65 326 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 K7EQS6 105 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 OR7C2O60412 319 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 MED6O75586 246 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 OR2B3O76000 313 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 ATP5G1P05496 136 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 ADRA2AP08913 450 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 CXCL3P19876 107 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 S100A2P29034 98 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 PSMB3P49720 205 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 CDK9P50750 372 aaKnown RBP2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 PFN3P60673 137 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 RAB5BP61020 215 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 RAB14P61106 215 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 PTGES3Q15185 160 aaKnown RBP2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 ZNF658BQ4V348 819 aaPredicted RBP2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 ABCA11PQ4W5N1 156 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 ELP2Q6IA86 826 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 LCN8Q6JVE9 175 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 Q6ZR03 302 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 FAM19A3Q7Z5A8 133 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 TMED4Q7Z7H5 227 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 LRRC25Q8N386 305 aaPredicted RBP2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 OR2M3Q8NG83 312 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 OR9I1Q8NGQ6 314 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 YIPF5Q969M3 257 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 RBMXL1Q96E39 390 aaKnown RBP2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 REEP6Q96HR9 211 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 DIRAS2Q96HU8 199 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 ANKRD36BP1Q96IX9 119 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 OR52E6Q96RD3 313 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 TRIM4Q9C037 500 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 GTSF1LQ9H1H1 148 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 TXNIPQ9H3M7 391 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 NMNAT1Q9HAN9 279 aaPredicted RBP2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 SND1-IT1Q9HBX3 110 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 XPNPEP1Q9NQW7 623 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 INIPQ9NRY2 104 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 CA10Q9NS85 328 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 RWDD2AQ9UIY3 292 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 TBX21Q9UL17 535 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 SLC22A7Q9Y694 548 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 ZNF532Q9HCE3 1301 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 FLT4P35916 1363 aa2.35□□□□□ -2.03
SPTLC1-203ENST00000461132 NOS1P29475 1434 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 ADGRL3Q9HAR2 1447 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 SETD1AO15047 1707 aaKnown RBP2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 TGIF2-C20orf24A0A0A6YYL0 155 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 DISC1C4P0D8 188 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 PSMD12O00232 456 aaPredicted RBP2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 FADS1O60427 444 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 NRASP01111 189 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 HRASP01112 189 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 KRASP01116 189 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 IL4P05112 153 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 GUSBP08236 651 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 CXCL2P19875 107 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 RANP62826 216 aaKnown RBP2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 HLA-DRB3P79483 266 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 MRPL2Q5T653 305 aaKnown RBP2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 HACD4Q5VWC8 232 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 PRSS54Q6PEW0 395 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 ATP5L2Q7Z4Y8 100 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 FER1L6-AS1Q8NA97 138 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 Q8WTZ3 238 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 RMI2Q96E14 147 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 ACY3Q96HD9 319 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 ABHD14BQ96IU4 210 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 PEBP4Q96S96 227 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 MED18Q9BUE0 208 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 KIFC1Q9BW19 673 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 PLA2G2FQ9BZM2 168 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 ULBP3Q9BZM4 244 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 TLNRD1Q9H1K6 362 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 IL37Q9NZH6 218 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 DOK5Q9P104 306 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 DNAJC12Q9UKB3 198 aa2.34□□□□□ -2.03
SPTLC1-203ENST00000461132 SIGLEC1Q9BZZ2 1709 aa2.34□□□□□ -2.04
SPTLC1-203ENST00000461132 PTPRTO14522 1441 aa2.34□□□□□ -2.04
SPTLC1-203ENST00000461132 NPATQ14207 1427 aa2.34□□□□□ -2.04
SPTLC1-203ENST00000461132 PTPRKQ15262 1439 aa2.34□□□□□ -2.04
SPTLC1-203ENST00000461132 IGKV1-6A0A0C4DH72 117 aa2.33□□□□□ -2.04
SPTLC1-203ENST00000461132 BTNL10A8MVZ5 291 aa2.33□□□□□ -2.04
SPTLC1-203ENST00000461132 EVPLLA8MZ36 301 aa2.33□□□□□ -2.04
SPTLC1-203ENST00000461132 BET1O15155 118 aa2.33□□□□□ -2.04
SPTLC1-203ENST00000461132 NOS1APO75052 506 aaPredicted RBP2.33□□□□□ -2.04
SPTLC1-203ENST00000461132 CNIH1O95406 144 aa2.33□□□□□ -2.04
SPTLC1-203ENST00000461132 IGKV1-39P01597 117 aa2.33□□□□□ -2.04
SPTLC1-203ENST00000461132 IGKV1D-39P04432 117 aa2.33□□□□□ -2.04
SPTLC1-203ENST00000461132 OR5G3P0C626 314 aa2.33□□□□□ -2.04
SPTLC1-203ENST00000461132 CISD3P0C7P0 127 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms