RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 P2RY14Q15391 338 aa18.33■□□□□ 0.52
PTPN4-208ENST00000460289 FBLN7Q53RD9 439 aa18.33■□□□□ 0.52
PTPN4-208ENST00000460289 SLC25A48Q6ZT89 311 aaKnown RBP18.33■□□□□ 0.52
PTPN4-208ENST00000460289 C6orf201Q7Z4U5 140 aa18.33■□□□□ 0.52
PTPN4-208ENST00000460289 CENPVQ7Z7K6 275 aaPredicted RBP18.33■□□□□ 0.52
PTPN4-208ENST00000460289 NICN1Q9BSH3 213 aa18.33■□□□□ 0.52
PTPN4-208ENST00000460289 V9GY05 133 aa18.33■□□□□ 0.52
PTPN4-208ENST00000460289 PDCD5O14737 125 aa18.32■□□□□ 0.52
PTPN4-208ENST00000460289 IGKV1D-33P01593 117 aa18.32■□□□□ 0.52
PTPN4-208ENST00000460289 IGKV1-33P01594 117 aa18.32■□□□□ 0.52
PTPN4-208ENST00000460289 CD28P10747 220 aa18.32■□□□□ 0.52
PTPN4-208ENST00000460289 HTD2P86397 168 aa18.32■□□□□ 0.52
PTPN4-208ENST00000460289 SSX1Q16384 188 aa18.32■□□□□ 0.52
PTPN4-208ENST00000460289 TMEM95Q3KNT9 176 aa18.32■□□□□ 0.52
PTPN4-208ENST00000460289 FAM53AQ6NSI3 398 aaPredicted RBP18.32■□□□□ 0.52
PTPN4-208ENST00000460289 ZNF439Q8NDP4 499 aa18.32■□□□□ 0.52
PTPN4-208ENST00000460289 OR10V1Q8NGI7 309 aa18.32■□□□□ 0.52
PTPN4-208ENST00000460289 RTN4IP1Q8WWV3 396 aaPredicted RBP18.32■□□□□ 0.52
PTPN4-208ENST00000460289 ST6GALNAC6Q969X2 333 aa18.32■□□□□ 0.52
PTPN4-208ENST00000460289 LPAR5Q9H1C0 372 aa18.32■□□□□ 0.52
PTPN4-208ENST00000460289 RIMS4Q9H426 269 aaPredicted RBP18.32■□□□□ 0.52
PTPN4-208ENST00000460289 KCNK15Q9H427 330 aa18.32■□□□□ 0.52
PTPN4-208ENST00000460289 NDUFB11Q9NX14 153 aa18.32■□□□□ 0.52
PTPN4-208ENST00000460289 TXNL1O43396 289 aa18.31■□□□□ 0.52
PTPN4-208ENST00000460289 REG1BP48304 166 aa18.31■□□□□ 0.52
PTPN4-208ENST00000460289 ZNF134P52741 427 aa18.31■□□□□ 0.52
PTPN4-208ENST00000460289 EBI3Q14213 229 aa18.31■□□□□ 0.52
PTPN4-208ENST00000460289 HNF4GQ14541 408 aa18.31■□□□□ 0.52
PTPN4-208ENST00000460289 MORN2Q502X0 79 aa18.31■□□□□ 0.52
PTPN4-208ENST00000460289 CT45A1Q5HYN5 189 aa18.31■□□□□ 0.52
PTPN4-208ENST00000460289 FAM89BQ8N5H3 189 aa18.31■□□□□ 0.52
PTPN4-208ENST00000460289 OR5AU1Q8NGC0 362 aa18.31■□□□□ 0.52
PTPN4-208ENST00000460289 OR51D1Q8NGF3 324 aa18.31■□□□□ 0.52
PTPN4-208ENST00000460289 CT45A3Q8NHU0 189 aa18.31■□□□□ 0.52
PTPN4-208ENST00000460289 GALMQ96C23 342 aa18.31■□□□□ 0.52
PTPN4-208ENST00000460289 ABRACLQ9P1F3 81 aa18.31■□□□□ 0.52
PTPN4-208ENST00000460289 JPT1Q9UK76 154 aa18.31■□□□□ 0.52
PTPN4-208ENST00000460289 TRAV1-2A0A0B4J238 106 aa18.3■□□□□ 0.52
PTPN4-208ENST00000460289 TRDV1A0A1B0GX56 115 aa18.3■□□□□ 0.52
PTPN4-208ENST00000460289 SLC31A2O15432 143 aa18.3■□□□□ 0.52
PTPN4-208ENST00000460289 FGF16O43320 207 aa18.3■□□□□ 0.52
PTPN4-208ENST00000460289 RGS11O94810 467 aa18.3■□□□□ 0.52
PTPN4-208ENST00000460289 GALP22466 123 aa18.3■□□□□ 0.52
PTPN4-208ENST00000460289 ZNF137PP52743 207 aa18.3■□□□□ 0.52
PTPN4-208ENST00000460289 C9orf152Q5JTZ5 239 aa18.3■□□□□ 0.52
PTPN4-208ENST00000460289 HIST2H2BDQ6DRA6 164 aa18.3■□□□□ 0.52
PTPN4-208ENST00000460289 CD200R1LQ6Q8B3 271 aa18.3■□□□□ 0.52
PTPN4-208ENST00000460289 NDUFA11Q86Y39 141 aa18.3■□□□□ 0.52
PTPN4-208ENST00000460289 TGIF2LXQ8IUE1 241 aa18.3■□□□□ 0.52
PTPN4-208ENST00000460289 FAM3DQ96BQ1 224 aa18.3■□□□□ 0.52
PTPN4-208ENST00000460289 CYYR1Q96J86 154 aa18.3■□□□□ 0.52
PTPN4-208ENST00000460289 CHMP1AQ9HD42 196 aaPredicted RBP18.3■□□□□ 0.52
PTPN4-208ENST00000460289 HSF4Q9ULV5 492 aa18.3■□□□□ 0.52
PTPN4-208ENST00000460289 MEGF8Q7Z7M0 2845 aa18.3■□□□□ 0.52
PTPN4-208ENST00000460289 NAPSAO96009 420 aa18.29■□□□□ 0.52
PTPN4-208ENST00000460289 CD1BP29016 333 aa18.29■□□□□ 0.52
PTPN4-208ENST00000460289 C2orf76Q3KRA6 126 aa18.29■□□□□ 0.52
PTPN4-208ENST00000460289 LY6G6FQ5SQ64 297 aa18.29■□□□□ 0.52
PTPN4-208ENST00000460289 UBE2UQ5VVX9 321 aa18.29■□□□□ 0.52
PTPN4-208ENST00000460289 IZUMO1Q8IYV9 350 aa18.29■□□□□ 0.52
PTPN4-208ENST00000460289 SPARTQ8N0X7 666 aa18.29■□□□□ 0.52
PTPN4-208ENST00000460289 OR52L2PQ8NGH6 319 aa18.29■□□□□ 0.52
PTPN4-208ENST00000460289 OR2T10Q8NGZ9 312 aa18.29■□□□□ 0.52
PTPN4-208ENST00000460289 CITED2Q99967 270 aaPredicted RBP18.29■□□□□ 0.52
PTPN4-208ENST00000460289 STEAP1Q9UHE8 339 aa18.29■□□□□ 0.52
PTPN4-208ENST00000460289 A0A0A6YYD4 124 aa18.28■□□□□ 0.52
PTPN4-208ENST00000460289 SH2D7A6NKC9 451 aaPredicted RBP18.28■□□□□ 0.52
PTPN4-208ENST00000460289 SOCS1O15524 211 aa18.28■□□□□ 0.52
PTPN4-208ENST00000460289 YPEL1O60688 119 aa18.28■□□□□ 0.52
PTPN4-208ENST00000460289 MYL9P24844 172 aa18.28■□□□□ 0.52
PTPN4-208ENST00000460289 CLDN12P56749 244 aa18.28■□□□□ 0.52
PTPN4-208ENST00000460289 HMGN3Q15651 99 aa18.28■□□□□ 0.52
PTPN4-208ENST00000460289 NSUN5P1Q3KNT7 163 aa18.28■□□□□ 0.52
PTPN4-208ENST00000460289 LYG1Q8N1E2 194 aa18.28■□□□□ 0.52
PTPN4-208ENST00000460289 C5orf56Q8N8D9 126 aa18.28■□□□□ 0.52
PTPN4-208ENST00000460289 FCGR1BQ92637 280 aa18.28■□□□□ 0.52
PTPN4-208ENST00000460289 EAF1Q96JC9 268 aaPredicted RBP18.28■□□□□ 0.52
PTPN4-208ENST00000460289 YPEL2Q96QA6 119 aa18.28■□□□□ 0.52
PTPN4-208ENST00000460289 IGHV3-72A0A0B4J1Y9 119 aa18.27■□□□□ 0.52
PTPN4-208ENST00000460289 MOB1BQ7L9L4 216 aa18.27■□□□□ 0.52
PTPN4-208ENST00000460289 OR56B1Q8NGI3 324 aa18.27■□□□□ 0.52
PTPN4-208ENST00000460289 ABHD14AQ9BUJ0 271 aa18.27■□□□□ 0.52
PTPN4-208ENST00000460289 RAB22AQ9UL26 194 aa18.27■□□□□ 0.52
PTPN4-208ENST00000460289 MGAT4AQ9UM21 535 aa18.27■□□□□ 0.52
PTPN4-208ENST00000460289 TRBV6-6A0A0A6YYG2 114 aa18.26■□□□□ 0.51
PTPN4-208ENST00000460289 OPN1MWP04001 364 aa18.26■□□□□ 0.51
PTPN4-208ENST00000460289 OPN1MW2P0DN77 364 aa18.26■□□□□ 0.51
PTPN4-208ENST00000460289 OPN1MW3P0DN78 364 aa18.26■□□□□ 0.51
PTPN4-208ENST00000460289 PPP1CCP36873 323 aaKnown RBP18.26■□□□□ 0.51
PTPN4-208ENST00000460289 VEGFCP49767 419 aa18.26■□□□□ 0.51
PTPN4-208ENST00000460289 CD83Q01151 205 aa18.26■□□□□ 0.51
PTPN4-208ENST00000460289 HES5Q5TA89 166 aa18.26■□□□□ 0.51
PTPN4-208ENST00000460289 ZNF880Q6PDB4 577 aa18.26■□□□□ 0.51
PTPN4-208ENST00000460289 OR4F17Q8NGA8 305 aa18.26■□□□□ 0.51
PTPN4-208ENST00000460289 SETD6Q8TBK2 473 aa18.26■□□□□ 0.51
PTPN4-208ENST00000460289 OR4F4Q96R69 305 aa18.26■□□□□ 0.51
PTPN4-208ENST00000460289 AK3Q9UIJ7 227 aa18.26■□□□□ 0.51
PTPN4-208ENST00000460289 NCBP2LA6PVI3 153 aaKnown RBP18.25■□□□□ 0.51
PTPN4-208ENST00000460289 FOXI3A8MTJ6 420 aaPredicted RBP18.25■□□□□ 0.51
PTPN4-208ENST00000460289 LDLRAD4O15165 306 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms