RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 ERGIC3Q9Y282 383 aa12.43□□□□□ -0.42
CHCHD3-204ENST00000457942 RRP9O43818 475 aaKnown RBP12.42□□□□□ -0.42
CHCHD3-204ENST00000457942 MOSP00540 346 aa12.42□□□□□ -0.42
CHCHD3-204ENST00000457942 MYF6P23409 242 aa12.42□□□□□ -0.42
CHCHD3-204ENST00000457942 VHLP40337 213 aa12.42□□□□□ -0.42
CHCHD3-204ENST00000457942 GPR12P47775 334 aa12.42□□□□□ -0.42
CHCHD3-204ENST00000457942 GPR50Q13585 617 aa12.42□□□□□ -0.42
CHCHD3-204ENST00000457942 EBI3Q14213 229 aa12.42□□□□□ -0.42
CHCHD3-204ENST00000457942 Q3ZCU0 254 aa12.42□□□□□ -0.42
CHCHD3-204ENST00000457942 C18orf65Q6ZTR6 163 aa12.42□□□□□ -0.42
CHCHD3-204ENST00000457942 CDH26Q8IXH8 852 aa12.42□□□□□ -0.42
CHCHD3-204ENST00000457942 TMEM104Q8NE00 496 aa12.42□□□□□ -0.42
CHCHD3-204ENST00000457942 CST11Q9H112 138 aa12.42□□□□□ -0.42
CHCHD3-204ENST00000457942 PLCXD1Q9NUJ7 323 aa12.42□□□□□ -0.42
CHCHD3-204ENST00000457942 FAM90A10PA6NDY2 464 aa12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 FAM90A7PA6NKC0 464 aa12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 FAM90A23PA8MXZ1 464 aa12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 RCC1P18754 421 aaPredicted RBP12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 FUT3P21217 361 aa12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 CD1BP29016 333 aa12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 THBS3P49746 956 aa12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 CXorf66Q5JRM2 361 aaPredicted RBP12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 TEX38Q6PEX7 206 aa12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 ETV3LQ6ZN32 361 aa12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 SLC25A48Q6ZT89 311 aaKnown RBP12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 Q96M66 194 aa12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 B9D2Q9BPU9 175 aa12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 UQCC2Q9BRT2 126 aa12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 MCRIP2Q9BUT9 160 aaKnown RBP12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 GON7Q9BXV9 100 aa12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 ANKRD60Q9BZ19 345 aa12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 ABCG5Q9H222 651 aa12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 TAF9BQ9HBM6 251 aa12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 OR2S2Q9NQN1 319 aa12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 FKBP14Q9NWM8 211 aa12.41□□□□□ -0.42
CHCHD3-204ENST00000457942 LINC01548A6NM66 108 aa12.4□□□□□ -0.42
CHCHD3-204ENST00000457942 ZNF736B4DX44 427 aaPredicted RBP12.4□□□□□ -0.42
CHCHD3-204ENST00000457942 PDCD6O75340 191 aa12.4□□□□□ -0.42
CHCHD3-204ENST00000457942 CA11O75493 328 aa12.4□□□□□ -0.42
CHCHD3-204ENST00000457942 CDK1P06493 297 aa12.4□□□□□ -0.42
CHCHD3-204ENST00000457942 SLC6A1P30531 599 aa12.4□□□□□ -0.42
CHCHD3-204ENST00000457942 MYCNOSP40205 109 aa12.4□□□□□ -0.42
CHCHD3-204ENST00000457942 RBM48Q5RL73 367 aaKnown RBP12.4□□□□□ -0.42
CHCHD3-204ENST00000457942 ZNF695Q8IW36 515 aa12.4□□□□□ -0.42
CHCHD3-204ENST00000457942 Q8N6K4 173 aa12.4□□□□□ -0.42
CHCHD3-204ENST00000457942 Q8N9W7 124 aa12.4□□□□□ -0.42
CHCHD3-204ENST00000457942 ZNF439Q8NDP4 499 aa12.4□□□□□ -0.42
CHCHD3-204ENST00000457942 ST6GALNAC6Q969X2 333 aa12.4□□□□□ -0.42
CHCHD3-204ENST00000457942 DUX3Q96PT4 197 aa12.4□□□□□ -0.42
CHCHD3-204ENST00000457942 S1PR3Q99500 378 aa12.4□□□□□ -0.42
CHCHD3-204ENST00000457942 SCN3BQ9NY72 215 aa12.4□□□□□ -0.42
CHCHD3-204ENST00000457942 BIRC6Q9NR09 4857 aa12.4□□□□□ -0.42
CHCHD3-204ENST00000457942 RPLP1P05386 114 aaKnown RBP12.39□□□□□ -0.43
CHCHD3-204ENST00000457942 CD1AP06126 327 aa12.39□□□□□ -0.43
CHCHD3-204ENST00000457942 VDAC1P21796 283 aa12.39□□□□□ -0.43
CHCHD3-204ENST00000457942 SOX6P35712 828 aa12.39□□□□□ -0.43
CHCHD3-204ENST00000457942 HSPA13P48723 471 aa12.39□□□□□ -0.43
CHCHD3-204ENST00000457942 PNLIPRP3Q17RR3 467 aa12.39□□□□□ -0.43
CHCHD3-204ENST00000457942 CT45A1Q5HYN5 189 aa12.39□□□□□ -0.43
CHCHD3-204ENST00000457942 LCNL1Q6ZST4 164 aa12.39□□□□□ -0.43
CHCHD3-204ENST00000457942 NANOGP1Q8N7R0 232 aa12.39□□□□□ -0.43
CHCHD3-204ENST00000457942 OR8H1Q8NGG4 311 aa12.39□□□□□ -0.43
CHCHD3-204ENST00000457942 CT45A3Q8NHU0 189 aa12.39□□□□□ -0.43
CHCHD3-204ENST00000457942 NEDD4LQ96PU5 975 aa12.39□□□□□ -0.43
CHCHD3-204ENST00000457942 ABHD14AQ9BUJ0 271 aa12.39□□□□□ -0.43
CHCHD3-204ENST00000457942 TMED9Q9BVK6 235 aa12.39□□□□□ -0.43
CHCHD3-204ENST00000457942 MND1Q9BWT6 205 aa12.39□□□□□ -0.43
CHCHD3-204ENST00000457942 CCDC90BQ9GZT6 254 aa12.39□□□□□ -0.43
CHCHD3-204ENST00000457942 GHRLQ9UBU3 117 aa12.39□□□□□ -0.43
CHCHD3-204ENST00000457942 SC5DO75845 299 aa12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 GLAP06280 429 aa12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 UBBP0CG47 229 aa12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 SLC2A2P11168 524 aaPredicted RBP12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 PPP1CCP36873 323 aaKnown RBP12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 ZNF134P52741 427 aa12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 ZNF137PP52743 207 aa12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 LSAMPQ13449 338 aa12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 INSL4Q14641 139 aa12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 GNMTQ14749 295 aa12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 MMDQ15546 238 aa12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 ACSM3Q53FZ2 586 aa12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 GLT8D1Q68CQ7 371 aa12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 UNQ9370/PRO34162Q6UXP9 181 aa12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 OR52L2PQ8NGH6 319 aa12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 MRPL30Q8TCC3 161 aaKnown RBP12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 RBMXL1Q96E39 390 aaKnown RBP12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 TMEM59Q9BXS4 323 aa12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 CHMP1AQ9HD42 196 aaPredicted RBP12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 GAR1Q9NY12 217 aaKnown RBP12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 JPT1Q9UK76 154 aa12.38□□□□□ -0.43
CHCHD3-204ENST00000457942 LANCL1O43813 399 aa12.37□□□□□ -0.43
CHCHD3-204ENST00000457942 RGS11O94810 467 aa12.37□□□□□ -0.43
CHCHD3-204ENST00000457942 MAP2K4P45985 399 aa12.37□□□□□ -0.43
CHCHD3-204ENST00000457942 F2RL1P55085 397 aa12.37□□□□□ -0.43
CHCHD3-204ENST00000457942 DEFB136Q30KP8 78 aa12.37□□□□□ -0.43
CHCHD3-204ENST00000457942 MORN2Q502X0 79 aa12.37□□□□□ -0.43
CHCHD3-204ENST00000457942 FAM27D1Q5T7N8 215 aa12.37□□□□□ -0.43
CHCHD3-204ENST00000457942 SIGIRRQ6IA17 410 aa12.37□□□□□ -0.43
CHCHD3-204ENST00000457942 OR10K2Q6IF99 312 aa12.37□□□□□ -0.43
CHCHD3-204ENST00000457942 GAPTQ8N292 157 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms