RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 ZNF106Q9H2Y7 1883 aaKnown RBP3.06□□□□□ -1.92
HMGB3P30-201ENST00000457863 HES4Q9HCC6 221 aa3.06□□□□□ -1.92
HMGB3P30-201ENST00000457863 DHCR7Q9UBM7 475 aaKnown RBP3.06□□□□□ -1.92
HMGB3P30-201ENST00000457863 ERG28Q9UKR5 140 aa3.06□□□□□ -1.92
HMGB3P30-201ENST00000457863 WASHC3Q9Y3C0 194 aa3.06□□□□□ -1.92
HMGB3P30-201ENST00000457863 FER1L5A0AVI2 2057 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 KIF13BQ9NQT8 1826 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 ARHGAP23Q9P227 1491 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 PLCH2O75038 1416 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 NOS1P29475 1434 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 ROBO3Q96MS0 1386 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 A0A087WUU8 490 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 A0A0J9YXV3 536 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 A0A0J9YY10 115 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 TEX48A0A1B0GUV7 120 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 A0A1B0GX78 115 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 WI2-2373I1.2A0A1W2PRP0 233 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 A0A1W2PS18 150 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 C5orf49A4QMS7 147 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 C5orf63A6NC05 138 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 UPK2O00526 184 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 MRASO14807 208 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 SERPINE1P05121 402 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 PRSS1P07477 247 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 PRSS2P07478 247 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 LGALS1P09382 135 aaKnown RBP3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 FOLR2P14207 255 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 CPMP14384 443 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 IGLL1P15814 213 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 TNFRSF1BP20333 461 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 NPY1RP25929 384 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 POLR2HP52434 150 aaKnown RBP3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 SLC18A1P54219 525 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 DAD1P61803 113 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 MRPS10P82664 201 aaKnown RBP3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 IFITM3Q01628 133 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 MEF2CQ06413 473 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 LAMTOR4Q0VGL1 99 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 BIKQ13323 160 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 RUNX3Q13761 415 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 ARFRP1Q13795 201 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 FZD2Q14332 565 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 PAFAH1B3Q15102 231 aaKnown RBP3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 FCN2Q15485 313 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 NEDD8Q15843 81 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 C17orf58Q2M2W7 97 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 Q499Y3 187 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 OCIAD2Q56VL3 154 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 MESTQ5EB52 335 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 TMEM236Q5W0B7 351 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 LCN8Q6JVE9 175 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 VN1R4Q7Z5H5 301 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 BAP18Q8IXM2 172 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 C11orf53Q8IXP5 236 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 GDPD1Q8N9F7 314 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 OR5A1Q8NGJ0 315 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 OR8S1Q8NH09 359 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 OR1L1Q8NH94 360 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 FLVCR1-AS1Q8TAF5 88 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 CT55Q8WUE5 264 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 MBD3L1Q8WWY6 194 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 DCUN1D4Q92564 292 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 ARL11Q969Q4 196 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 FAM3DQ96BQ1 224 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 SMIM8Q96KF7 97 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 LYZL4Q96KX0 146 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 KLF6Q99612 283 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 PRSS27Q9BQR3 290 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 TMEM70Q9BUB7 260 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 LRRC61Q9BV99 259 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 C19orf24Q9BVV8 132 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 LINC00470Q9BZP3 86 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 C20orf27Q9GZN8 174 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 SLC25A31Q9H0C2 315 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 EBF2Q9HAK2 575 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 POPDC3Q9HBV1 291 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 NOX3Q9HBY0 568 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 SIX2Q9NPC8 291 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 GPR84Q9NQS5 396 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 TMEM38BQ9NVV0 291 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 RBFOX1Q9NWB1 397 aaKnown RBP3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 OCIAD1Q9NX40 245 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 CLCF1Q9UBD9 225 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 SIGLEC7Q9Y286 467 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 INSL5Q9Y5Q6 135 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 DYSFO75923 2080 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 MYH7P12883 1935 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 DOCK5Q9H7D0 1870 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 BCORL1Q5H9F3 1711 aa3.05□□□□□ -1.92
HMGB3P30-201ENST00000457863 ADGBQ8N7X0 1667 aa3.04□□□□□ -1.92
HMGB3P30-201ENST00000457863 TCOF1Q13428 1488 aaKnown RBP3.04□□□□□ -1.92
HMGB3P30-201ENST00000457863 IBTKQ9P2D0 1353 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P30-201ENST00000457863 LRRK1Q38SD2 2015 aa3.04□□□□□ -1.92
HMGB3P30-201ENST00000457863 OTOFQ9HC10 1997 aa3.04□□□□□ -1.92
HMGB3P30-201ENST00000457863 IGHV3OR16-13A0A075B7E8 117 aa3.04□□□□□ -1.92
HMGB3P30-201ENST00000457863 A0A0G2JN53 185 aa3.04□□□□□ -1.92
HMGB3P30-201ENST00000457863 F6UZH7 168 aa3.04□□□□□ -1.92
HMGB3P30-201ENST00000457863 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P30-201ENST00000457863 H3BSA7 217 aa3.04□□□□□ -1.92
HMGB3P30-201ENST00000457863 FFAR1O14842 300 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms