RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 KPTNQ9Y664 436 aa12.71□□□□□ -0.38
LDLR-202ENST00000455727 INTS1Q8N201 2190 aaKnown RBP12.7□□□□□ -0.38
LDLR-202ENST00000455727 A0A1B0GW64 132 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 F12P00748 615 aaPredicted RBP12.7□□□□□ -0.38
LDLR-202ENST00000455727 ATP6V0CP27449 155 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 CEACAM6P40199 344 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 EIF2S3P41091 472 aaKnown RBP12.7□□□□□ -0.38
LDLR-202ENST00000455727 ASCL1P50553 236 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 GUK1Q16774 197 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 ZNF718Q3SXZ3 478 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 MBNL2Q5VZF2 373 aaKnown RBP12.7□□□□□ -0.38
LDLR-202ENST00000455727 IGFL3Q6UXB1 125 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 CXorf67Q86X51 503 aaPredicted RBP12.7□□□□□ -0.38
LDLR-202ENST00000455727 PRR18Q8N4B5 295 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 ZADH2Q8N4Q0 377 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 STARD4Q96DR4 205 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 GNPNAT1Q96EK6 184 aaPredicted RBP12.7□□□□□ -0.38
LDLR-202ENST00000455727 TAAR6Q96RI8 345 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 TOLLIPQ9H0E2 274 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 PROCRQ9UNN8 238 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 MBD3L4A6NDZ8 208 aaPredicted RBP12.7□□□□□ -0.38
LDLR-202ENST00000455727 MBD3L3A6NE82 208 aaPredicted RBP12.7□□□□□ -0.38
LDLR-202ENST00000455727 MBD3L5A6NJ08 208 aaPredicted RBP12.7□□□□□ -0.38
LDLR-202ENST00000455727 PSPNO60542 156 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 IGKV1-39P01597 117 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 IGKV1D-39P04432 117 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 CEACAM1P13688 526 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 OMGP23515 440 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 FHITP49789 147 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 DYNLT3P51808 116 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 TMEM88Q6PEY1 159 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 ACP7Q6ZNF0 438 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 ZNF610Q8N9Z0 462 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 ZBTB34Q8NCN2 500 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 OR2G3Q8NGZ4 309 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 MBD3L2Q8NHZ7 208 aaPredicted RBP12.7□□□□□ -0.38
LDLR-202ENST00000455727 PPP1R3CQ9UQK1 317 aa12.7□□□□□ -0.38
LDLR-202ENST00000455727 RBM7Q9Y580 266 aaKnown RBP12.7□□□□□ -0.38
LDLR-202ENST00000455727 EP300Q09472 2414 aaPredicted RBP12.7□□□□□ -0.38
LDLR-202ENST00000455727 PRRC2CQ9Y520 2896 aaKnown RBP12.69□□□□□ -0.38
LDLR-202ENST00000455727 GTF3C1Q12789 2109 aa12.69□□□□□ -0.38
LDLR-202ENST00000455727 KIAA2026Q5HYC2 2103 aa12.69□□□□□ -0.38
LDLR-202ENST00000455727 RNF212BA8MTL3 300 aa12.69□□□□□ -0.38
LDLR-202ENST00000455727 TIMM8AO60220 97 aaPredicted RBP12.69□□□□□ -0.38
LDLR-202ENST00000455727 RPL23AP62750 156 aaKnown RBP12.69□□□□□ -0.38
LDLR-202ENST00000455727 ZNF585BQ52M93 769 aa12.69□□□□□ -0.38
LDLR-202ENST00000455727 TMEM182Q6ZP80 229 aaPredicted RBP12.69□□□□□ -0.38
LDLR-202ENST00000455727 GALMQ96C23 342 aa12.69□□□□□ -0.38
LDLR-202ENST00000455727 OR14J1Q9UGF5 321 aa12.69□□□□□ -0.38
LDLR-202ENST00000455727 WSB1Q9Y6I7 421 aa12.69□□□□□ -0.38
LDLR-202ENST00000455727 OOEPA6NGQ2 149 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 IFNL4K9M1U5 179 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 C1QL1O75973 258 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 CST7O76096 145 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 GCH1P30793 250 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 WDR82Q6UXN9 313 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 Q6ZR03 302 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 BEND4Q6ZU67 534 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 DRAM1Q8N682 238 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 KDF1Q8NAX2 398 aaPredicted RBP12.68□□□□□ -0.38
LDLR-202ENST00000455727 PBDC1Q9BVG4 233 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 SMDT1Q9H4I9 107 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 LOC400499M0QZD8 3231 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 IGHV2OR16-5A0A0B4J2B6 119 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 IGHV1-18A0A0C4DH31 117 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 IGHV3-64DA0A0J9YX35 117 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 OR5H1A6NKK0 313 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 TXNL1O43396 289 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 MZT1Q08AG7 82 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 Q6ZRM9 215 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 ZNF826PQ6ZT77 177 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 BHLHA15Q7RTS1 189 aaPredicted RBP12.68□□□□□ -0.38
LDLR-202ENST00000455727 STX12Q86Y82 276 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 CBLN2Q8IUK8 224 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 ATP5SQ99766 215 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 HIPK2Q9H2X6 1198 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 KCNS2Q9ULS6 477 aa12.68□□□□□ -0.38
LDLR-202ENST00000455727 NDUFA2O43678 99 aa12.67□□□□□ -0.38
LDLR-202ENST00000455727 DFFBO76075 338 aa12.67□□□□□ -0.38
LDLR-202ENST00000455727 IGKV1-5P01602 117 aa12.67□□□□□ -0.38
LDLR-202ENST00000455727 EPHA1P21709 976 aa12.67□□□□□ -0.38
LDLR-202ENST00000455727 CEBPDP49716 269 aaPredicted RBP12.67□□□□□ -0.38
LDLR-202ENST00000455727 SULT1A1P50225 295 aa12.67□□□□□ -0.38
LDLR-202ENST00000455727 FLI1Q01543 452 aaPredicted RBP12.67□□□□□ -0.38
LDLR-202ENST00000455727 MSMO1Q15800 293 aa12.67□□□□□ -0.38
LDLR-202ENST00000455727 HFEQ30201 348 aa12.67□□□□□ -0.38
LDLR-202ENST00000455727 IQCF2Q8IXL9 164 aa12.67□□□□□ -0.38
LDLR-202ENST00000455727 ZNF295-AS1Q8N0V1 137 aa12.67□□□□□ -0.38
LDLR-202ENST00000455727 RNASE11Q8TAA1 199 aaKnown RBP12.67□□□□□ -0.38
LDLR-202ENST00000455727 FAM213BQ8TBF2 198 aa12.67□□□□□ -0.38
LDLR-202ENST00000455727 BTBD17A6NE02 478 aa12.67□□□□□ -0.38
LDLR-202ENST00000455727 C12orf77C9JDV5 145 aa12.67□□□□□ -0.38
LDLR-202ENST00000455727 H7C2Y5 167 aa12.67□□□□□ -0.38
LDLR-202ENST00000455727 WNT9BO14905 357 aa12.67□□□□□ -0.38
LDLR-202ENST00000455727 FABP6P51161 128 aa12.67□□□□□ -0.38
LDLR-202ENST00000455727 SEM1Q6ZVN7 128 aa12.67□□□□□ -0.38
LDLR-202ENST00000455727 ZNF645Q8N7E2 425 aa12.67□□□□□ -0.38
LDLR-202ENST00000455727 EIF5A2Q9GZV4 153 aaKnown RBP12.67□□□□□ -0.38
LDLR-202ENST00000455727 OPN3Q9H1Y3 402 aaPredicted RBP12.67□□□□□ -0.38
LDLR-202ENST00000455727 HEATR1Q9H583 2144 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms