RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 CHRFAM7AQ494W8 412 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 ZNF782Q6ZMW2 699 aaPredicted RBP9.03□□□□□ -0.96
SCN9A-205ENST00000454569 DRAXINQ8NBI3 349 aaPredicted RBP9.03□□□□□ -0.96
SCN9A-205ENST00000454569 LY6G5BQ8NDX9 201 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 WFDC11Q8NEX6 87 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 OR13C8Q8NGS7 320 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 OR5H2Q8NGV7 314 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 IL1F10Q8WWZ1 152 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 NINJ1Q92982 152 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 LEAP2Q969E1 77 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 DACT3Q96B18 629 aaPredicted RBP9.03□□□□□ -0.96
SCN9A-205ENST00000454569 MARVELD1Q9BSK0 173 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 NCOR1P1Q9H4R4 102 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 LPAR2Q9HBW0 351 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 CALYQ9NYX4 217 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 EHFQ9NZC4 300 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 RPUSD1Q9UJJ7 312 aaKnown RBP9.03□□□□□ -0.96
SCN9A-205ENST00000454569 EDARQ9UNE0 448 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 SETXQ7Z333 2677 aaKnown RBP9.02□□□□□ -0.96
SCN9A-205ENST00000454569 ACANP16112 2415 aa9.02□□□□□ -0.96
SCN9A-205ENST00000454569 TRAV6A0A075B6T7 132 aa9.02□□□□□ -0.97
SCN9A-205ENST00000454569 NPIPB11E5RHQ5 1161 aa9.02□□□□□ -0.97
SCN9A-205ENST00000454569 INMT-MINDY4F8WBC2 141 aa9.02□□□□□ -0.97
SCN9A-205ENST00000454569 OR5H8P0DN80 308 aa9.02□□□□□ -0.97
SCN9A-205ENST00000454569 LOXL3P58215 753 aa9.02□□□□□ -0.97
SCN9A-205ENST00000454569 ARPC4P59998 168 aa9.02□□□□□ -0.97
SCN9A-205ENST00000454569 MEF2DQ14814 521 aa9.02□□□□□ -0.97
SCN9A-205ENST00000454569 RNASE10Q5GAN6 216 aaKnown RBP9.02□□□□□ -0.97
SCN9A-205ENST00000454569 PRAMEF5Q5TYX0 476 aa9.02□□□□□ -0.97
SCN9A-205ENST00000454569 NLRC3Q7RTR2 1065 aa9.02□□□□□ -0.97
SCN9A-205ENST00000454569 CADM3Q8N126 398 aa9.02□□□□□ -0.97
SCN9A-205ENST00000454569 CIARTQ8N365 385 aaPredicted RBP9.02□□□□□ -0.97
SCN9A-205ENST00000454569 OR10V1Q8NGI7 309 aa9.02□□□□□ -0.97
SCN9A-205ENST00000454569 C8orf46Q8TAG6 207 aa9.02□□□□□ -0.97
SCN9A-205ENST00000454569 C17orf50Q8WW18 174 aa9.02□□□□□ -0.97
SCN9A-205ENST00000454569 Q96MF0 132 aa9.02□□□□□ -0.97
SCN9A-205ENST00000454569 CABLES2Q9BTV7 478 aa9.02□□□□□ -0.97
SCN9A-205ENST00000454569 C20orf85Q9H1P6 137 aa9.02□□□□□ -0.97
SCN9A-205ENST00000454569 FLVCR2Q9UPI3 526 aa9.02□□□□□ -0.97
SCN9A-205ENST00000454569 LINC00312Q9Y6C7 94 aa9.02□□□□□ -0.97
SCN9A-205ENST00000454569 TRGV10A0A0A0MS01 117 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 TRBV6-7A0A0A0MS04 114 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 PPIAL4CA0A0B4J2A2 164 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 IGKV1D-13A0A0B4J2D9 117 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 KBTBD11-OT1A0A1B0GTJ5 212 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 hADV38S2A0JD32 116 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 OR5H14A6NHG9 310 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 CYSRT1A8MQ03 144 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 H7C1Q1 480 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 HEXAP06865 529 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 PPIAL4GP0DN37 164 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 IGKV1-13P0DP09 117 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 TBPP20226 339 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 GZMHP20718 246 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 PPP1CCP36873 323 aaKnown RBP9.01□□□□□ -0.97
SCN9A-205ENST00000454569 OR3A3P47888 321 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 DSCR9P59020 149 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 MEF2CQ06413 473 aaPredicted RBP9.01□□□□□ -0.97
SCN9A-205ENST00000454569 RBMS2Q15434 407 aaKnown RBP9.01□□□□□ -0.97
SCN9A-205ENST00000454569 TATDN3Q17R31 274 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 ACTBL2Q562R1 376 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 ESCO2Q56NI9 601 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 VAX1Q5SQQ9 334 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 AADACL3Q5VUY0 350 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 DHRS11Q6UWP2 260 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 MOB1BQ7L9L4 216 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 Q8N7P7 452 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 ZNF565Q8N9K5 539 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 OR4A4PQ8NGN8 299 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 ZNF2Q9BSG1 426 aaPredicted RBP9.01□□□□□ -0.97
SCN9A-205ENST00000454569 KCNIP1Q9NZI2 227 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 OR6C3Q9NZP0 311 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 ZNRD1Q9P1U0 126 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 SLC23A1Q9UHI7 598 aa9.01□□□□□ -0.97
SCN9A-205ENST00000454569 CSPG4Q6UVK1 2322 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 LOC105371242A0A075B767 164 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 ELOA3CA0A087WX78 387 aaPredicted RBP9□□□□□ -0.97
SCN9A-205ENST00000454569 A0A0B4J293 547 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 KIR2DS1A0A191URI9 304 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 A0A1W2PPE3 182 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 ZNF729A6NN14 1252 aaPredicted RBP9□□□□□ -0.97
SCN9A-205ENST00000454569 DISC1C4P0D8 188 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 F2RL2O00254 374 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 SLC31A2O15432 143 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 DHFRP00374 187 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 H2AFB2P0C5Z0 115 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 ZNF728P0DKX0 622 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 USF1P22415 310 aaPredicted RBP9□□□□□ -0.97
SCN9A-205ENST00000454569 AADACP22760 399 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 FCGR2CP31995 323 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 KIR2DS4P43632 304 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 NPY4RP50391 375 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 ZNF134P52741 427 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 RAB25P57735 213 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 TAS2R46P59540 309 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 KIR2DS1Q14954 304 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 SCGB2B2Q4G0G5 96 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 C6orf183Q5T699 404 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 LHFPL1Q86WI0 220 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 H1FOOQ8IZA3 346 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms