RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 CDKN2CP42773 168 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 GLP1RP43220 463 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 PPOXP50336 477 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 IDH3GP51553 393 aaPredicted RBP3.17□□□□□ -1.9
LINC00393-202ENST00000452852 EGFEM1PQ0D2K5 195 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 BNIP2Q12982 314 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 Q1RN00 199 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 TRMT5Q32P41 509 aaKnown RBP3.17□□□□□ -1.9
LINC00393-202ENST00000452852 C1orf100Q5SVJ3 147 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 C6orf183Q5T699 404 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 C1orf140Q5VVS0 124 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 AP1ARQ63HQ0 302 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 DUX4L9Q6RFH8 374 aaPredicted RBP3.17□□□□□ -1.9
LINC00393-202ENST00000452852 C5orf46Q6UWT4 87 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 MRPL21Q7Z2W9 205 aaKnown RBP3.17□□□□□ -1.9
LINC00393-202ENST00000452852 HDDC2Q7Z4H3 204 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 LYG1Q8N1E2 194 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 MREGQ8N565 214 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 JAGN1Q8N5M9 183 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 ASCC1Q8N9N2 400 aaKnown RBP3.17□□□□□ -1.9
LINC00393-202ENST00000452852 CCDC71LQ8N9Z2 235 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 MFSD8Q8NHS3 518 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 RHOXF1Q8NHV9 184 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 CD300LFQ8TDQ1 290 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 ARPC1AQ92747 370 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 RAB1CQ92928 201 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 KIR2DL4Q99706 377 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 TMEM109Q9BVC6 243 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 LINC00470Q9BZP3 86 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 POLR2J2Q9GZM3 115 aaKnown RBP3.17□□□□□ -1.9
LINC00393-202ENST00000452852 POLR2J3Q9H1A7 115 aaKnown RBP3.17□□□□□ -1.9
LINC00393-202ENST00000452852 TPT1P8Q9HAU6 139 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 NKIRAS1Q9NYS0 192 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 DUX4Q9UBX2 424 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 Q9UF83 564 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 CDH10Q9Y6N8 788 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 ABCA1O95477 2261 aa3.17□□□□□ -1.9
LINC00393-202ENST00000452852 TRAV36DV7A0A075B6V5 113 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 A0A096LNT2 108 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 ZNF816-ZNF321PA0A0X1KG74 233 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 TMEM120BA0PK00 339 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 ZNF726A6NNF4 738 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 M0R233 179 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 UBDO15205 165 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 MRPS12O15235 138 aaKnown RBP3.16□□□□□ -1.9
LINC00393-202ENST00000452852 POLR3GO15318 223 aaPredicted RBP3.16□□□□□ -1.9
LINC00393-202ENST00000452852 TCF21O43680 179 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 OR2T1O43869 369 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 ZNF780AO75290 641 aaPredicted RBP3.16□□□□□ -1.9
LINC00393-202ENST00000452852 ENTPD5O75356 428 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 EIF3GO75821 320 aaKnown RBP eCLIP3.16□□□□□ -1.9
LINC00393-202ENST00000452852 RAB36O95755 333 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 IGHV3-23P01764 117 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 HLA-HP01893 362 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 CECR9P0C854 216 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 CD79AP11912 226 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 NR2C1P13056 603 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 ZP3P21754 424 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 PPIBP23284 216 aaKnown RBP3.16□□□□□ -1.9
LINC00393-202ENST00000452852 FMO3P31513 532 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 ARR3P36575 388 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 AQP2P41181 271 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 GPR6P46095 362 aaPredicted RBP3.16□□□□□ -1.9
LINC00393-202ENST00000452852 POLR2JP52435 117 aaKnown RBP3.16□□□□□ -1.9
LINC00393-202ENST00000452852 RPS23P62266 143 aaKnown RBP3.16□□□□□ -1.9
LINC00393-202ENST00000452852 ADARB1P78563 741 aaKnown RBP3.16□□□□□ -1.9
LINC00393-202ENST00000452852 ZNF92Q03936 586 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 FADDQ13158 208 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 VAX1Q5SQQ9 334 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 ATAD3CQ5T2N8 411 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 GPR107Q5VW38 600 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 STUMQ69YW2 141 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 FAM122BQ7Z309 247 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 FAM86B1Q8N7N1 296 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 ZIC4Q8N9L1 334 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 TMEM104Q8NE00 496 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 OR6N1Q8NGY5 312 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 TYMSOSQ8TAI1 123 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 ZNF596Q8TC21 504 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 FANK1Q8TC84 345 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 ACOT11Q8WXI4 607 aaPredicted RBP3.16□□□□□ -1.9
LINC00393-202ENST00000452852 TMEM54Q969K7 222 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 SLC35B4Q969S0 331 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 RPUSD4Q96CM3 377 aaKnown RBP3.16□□□□□ -1.9
LINC00393-202ENST00000452852 TEX37Q96LM6 180 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 FOXN4Q96NZ1 517 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 OPALINQ96PE5 141 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 EBF4Q9BQW3 602 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 BPESC1Q9GZL8 116 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 C20orf27Q9GZN8 174 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 WDR55Q9H6Y2 383 aaPredicted RBP3.16□□□□□ -1.9
LINC00393-202ENST00000452852 ZNF442Q9H7R0 627 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 C12orf10Q9HB07 376 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 TMEM27Q9HBJ8 222 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 CCDC59Q9P031 241 aaKnown RBP3.16□□□□□ -1.9
LINC00393-202ENST00000452852 FBXL3Q9UKT7 428 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 POFUT2Q9Y2G5 429 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 KPTNQ9Y664 436 aa3.16□□□□□ -1.9
LINC00393-202ENST00000452852 V9GYY5 206 aaPredicted RBP3.16□□□□□ -1.9
LINC00393-202ENST00000452852 ROS1P08922 2347 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms