RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 RPL12P30050 165 aaKnown RBP10.29□□□□□ -0.76
COL27A1-202ENST00000451716 ALKBH6Q3KRA9 238 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 ADAM5Q6NVV9 412 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 FAM71E2Q8N5Q1 922 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 RCC1LQ96I51 464 aaKnown RBP10.29□□□□□ -0.76
COL27A1-202ENST00000451716 TRIB1Q96RU8 372 aa10.29□□□□□ -0.76
COL27A1-202ENST00000451716 IGKV1D-13A0A0B4J2D9 117 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 A0A1W2PN81 502 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 DEDDO75618 318 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 IGKV1-13P0DP09 117 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 GNRHRP30968 328 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 CHRNA7P36544 502 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 SRSF3P84103 164 aaKnown RBP10.28□□□□□ -0.76
COL27A1-202ENST00000451716 LIAT1Q6ZQX7 453 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 CNEP1R1Q8N9A8 125 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 MSI2Q96DH6 328 aaKnown RBP10.28□□□□□ -0.76
COL27A1-202ENST00000451716 OR2J1Q9GZK6 312 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 Q9N2K0 584 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 AKAP13Q12802 2813 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 hCG_1809904A0A1W2PP81 198 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 A0A1W2PR64 198 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 A0A1W2PRV1 198 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 ZNF705EA8MWA4 302 aaPredicted RBP10.28□□□□□ -0.76
COL27A1-202ENST00000451716 NAPSAO96009 420 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 IGHV1-2P23083 117 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 AKR1C3P42330 323 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 C10orf91Q5T1B1 145 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 SUMF2Q8NBJ7 301 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 ERGIC1Q969X5 290 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 GALNT14Q96FL9 552 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 NOL4LQ96MY1 436 aaPredicted RBP10.28□□□□□ -0.76
COL27A1-202ENST00000451716 PRRX2Q99811 253 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 FBXL17Q9UF56 701 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 OR14J1Q9UGF5 321 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 TUBD1Q9UJT1 453 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 ZNF318Q5VUA4 2279 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 IGKV1-6A0A0C4DH72 117 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 METTL15P1P0C7V9 234 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 FAM157CP0CG43 387 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 TMEM33P57088 247 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 HOXA4Q00056 320 aaPredicted RBP10.28□□□□□ -0.76
COL27A1-202ENST00000451716 NAAAQ02083 359 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 SLC35G3Q8N808 338 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 UBALD1Q8TB05 177 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 PARP12Q9H0J9 701 aaKnown RBP10.28□□□□□ -0.76
COL27A1-202ENST00000451716 TMEM231Q9H6L2 316 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 TAF9BQ9HBM6 251 aa10.28□□□□□ -0.76
COL27A1-202ENST00000451716 HSD17B6O14756 317 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 FGF16O43320 207 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 TNFSF12O43508 249 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 GALR2O43603 387 aaPredicted RBP10.27□□□□□ -0.77
COL27A1-202ENST00000451716 TK1P04183 234 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 RPLP1P05386 114 aaKnown RBP10.27□□□□□ -0.77
COL27A1-202ENST00000451716 GNG3P63215 75 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 DNLZQ5SXM8 178 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 TMEM268Q5VZI3 342 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 ZNF818PQ6ZRF7 136 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 FAM216AQ8WUB2 273 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 RNF141Q8WVD5 230 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 FAM210BQ96KR6 192 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 SYT3Q9BQG1 590 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 HRH4Q9H3N8 390 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 CLEC5AQ9NY25 188 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 CACNA1DQ01668 2161 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 TRAV24A0A0B4J272 114 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 SLC33A1O00400 549 aaPredicted RBP10.27□□□□□ -0.77
COL27A1-202ENST00000451716 MPPED1O15442 326 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 AGFG2O95081 481 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 CD81P60033 236 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 NCR3LG1Q68D85 454 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 SAXO1Q8IYX7 474 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 GAPTQ8N292 157 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 NANOS1Q8WY41 292 aaKnown RBP10.27□□□□□ -0.77
COL27A1-202ENST00000451716 C18orf12Q96KH6 178 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 PACRGQ96M98 296 aaPredicted RBP10.27□□□□□ -0.77
COL27A1-202ENST00000451716 RCC2Q9P258 522 aaKnown RBP10.27□□□□□ -0.77
COL27A1-202ENST00000451716 AMDHD2Q9Y303 409 aa10.27□□□□□ -0.77
COL27A1-202ENST00000451716 INTS1Q8N201 2190 aaKnown RBP10.27□□□□□ -0.77
COL27A1-202ENST00000451716 C3orf85A0A1B0GTC6 90 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 SERTM2A0A1B0GWG4 89 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 RAB5AP20339 215 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 ID4P47928 161 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 ASCL1P50553 236 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 F2RL1P55085 397 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 NDUFA6P56556 154 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 UBE2NP61088 152 aaKnown RBP10.26□□□□□ -0.77
COL27A1-202ENST00000451716 TBC1D28Q2M2D7 210 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 WDR86Q86TI4 376 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 TBC1D26Q86UD7 250 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 ZNF573Q86YE8 665 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 FAM58AQ8N1B3 248 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 GMPPAQ96IJ6 420 aaPredicted RBP10.26□□□□□ -0.77
COL27A1-202ENST00000451716 DIRC2Q96SL1 478 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 GP6Q9HCN6 339 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 FAM90A10PA6NDY2 464 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 FAM90A18PA6NE21 464 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 FAM90A16PA6NEW6 464 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 FAM90A20PA6NIJ5 464 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 FAM90A8PA6NJQ4 464 aa10.26□□□□□ -0.77
COL27A1-202ENST00000451716 FAM90A7PA6NKC0 464 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms