RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 VAMP5O95183 116 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 S100A7P31151 101 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 MEF2BQ02080 365 aaPredicted RBP10.71□□□□□ -0.69
UBE3B-204ENST00000449510 HGFACQ04756 655 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 PLPPR5Q32ZL2 321 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 SLC35E3Q7Z769 313 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 OR4A16Q8NH70 328 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 GPR146Q96CH1 333 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 Q96M66 194 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 MRPS17Q9Y2R5 130 aaKnown RBP10.71□□□□□ -0.69
UBE3B-204ENST00000449510 PITX3O75364 302 aa10.71□□□□□ -0.7
UBE3B-204ENST00000449510 HNRNPA3P51991 378 aaKnown RBP10.71□□□□□ -0.7
UBE3B-204ENST00000449510 TCTAP57738 103 aa10.71□□□□□ -0.7
UBE3B-204ENST00000449510 CATR1Q13166 79 aa10.71□□□□□ -0.7
UBE3B-204ENST00000449510 MRGPRGQ86SM5 289 aa10.71□□□□□ -0.7
UBE3B-204ENST00000449510 WDFY1Q8IWB7 410 aa10.71□□□□□ -0.7
UBE3B-204ENST00000449510 OR51G1Q8NGK1 321 aa10.71□□□□□ -0.7
UBE3B-204ENST00000449510 TMEM171Q8WVE6 324 aa10.71□□□□□ -0.7
UBE3B-204ENST00000449510 GLRX2Q9NS18 164 aa10.71□□□□□ -0.7
UBE3B-204ENST00000449510 FZR1Q9UM11 496 aa10.71□□□□□ -0.7
UBE3B-204ENST00000449510 CHD3Q12873 2000 aaKnown RBP10.71□□□□□ -0.7
UBE3B-204ENST00000449510 A0A1B0GUS0 222 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 C17orf112F2Z3M2 114 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 MPLP40238 635 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 CNN1P51911 297 aaKnown RBP10.7□□□□□ -0.7
UBE3B-204ENST00000449510 ACOT6Q3I5F7 207 aaPredicted RBP10.7□□□□□ -0.7
UBE3B-204ENST00000449510 MRPL54Q6P161 138 aaKnown RBP10.7□□□□□ -0.7
UBE3B-204ENST00000449510 GUSBP11Q6P575 273 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 NEIL1Q96FI4 390 aaPredicted RBP10.7□□□□□ -0.7
UBE3B-204ENST00000449510 RCC1LQ96I51 464 aaKnown RBP10.7□□□□□ -0.7
UBE3B-204ENST00000449510 TPPP3Q9BW30 176 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 PLA2G2EQ9NZK7 142 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 KLF2Q9Y5W3 355 aaPredicted RBP10.7□□□□□ -0.7
UBE3B-204ENST00000449510 TRAV38-1A0A0B4J264 116 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 E9PLN8 166 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 APOA2P02652 100 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 HERPUD1Q15011 391 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 NUFIP2Q7Z417 695 aaKnown RBP10.7□□□□□ -0.7
UBE3B-204ENST00000449510 GATAD1Q8WUU5 269 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 LYRM2Q9NU23 88 aaPredicted RBP10.7□□□□□ -0.7
UBE3B-204ENST00000449510 PRR14LQ5THK1 2151 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 SIAH2O43255 324 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 TPPP2P59282 170 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 RAB31Q13636 194 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 PRR31Q5SQ13 230 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 TCF23Q7RTU1 214 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 C11orf42Q8N5U0 333 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 PHOSPHO2Q8TCD6 241 aa10.7□□□□□ -0.7
UBE3B-204ENST00000449510 PLXNA3P51805 1871 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 USF3Q68DE3 2245 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 A0A0J9YW62 118 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 PMS2P1A4D2B8 440 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 CTXN2P0C2S0 81 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 FOLR2P14207 255 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 SELEP16581 610 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 LSM6P62312 80 aaKnown RBP10.69□□□□□ -0.7
UBE3B-204ENST00000449510 SELENOHQ8IZQ5 122 aaKnown RBP10.69□□□□□ -0.7
UBE3B-204ENST00000449510 ABHD5Q8WTS1 349 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 PARLQ9H300 379 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 ARL2-SNX15V9GYD0 113 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 DUXBA0A1W2PPF3 345 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 C20orf202A1L168 122 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 K7N7A8 449 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 IFNL4K9M1U5 179 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 SYNGR1O43759 233 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 TOX4O94842 621 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 FOLR3P41439 243 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 CDC34P49427 236 aaPredicted RBP10.69□□□□□ -0.7
UBE3B-204ENST00000449510 HYAL1Q12794 435 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 C3AR1Q16581 482 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 ABHD17BQ5VST6 288 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 H1FOOQ8IZA3 346 aaPredicted RBP10.69□□□□□ -0.7
UBE3B-204ENST00000449510 D2HGDHQ8N465 521 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 DEFB108BQ8NET1 73 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 MOB3AQ96BX8 217 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 TMEM9BQ9NQ34 198 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 IGKV1D-13A0A0B4J2D9 117 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 LILRA5A6NI73 299 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 IGKV1-13P0DP09 117 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 F2RP25116 425 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 OR3A1P47881 315 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 CAMPP49913 170 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 FABP6P51161 128 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 RAB35Q15286 201 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 ALKBH6Q3KRA9 238 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 FNDC7Q5VTL7 733 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 ZNF664Q8N3J9 261 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 LYZL4Q96KX0 146 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 OR2D2Q9H210 308 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 NAGKQ9UJ70 344 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 TUBD1Q9UJT1 453 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 PI4KAP42356 2102 aa10.69□□□□□ -0.7
UBE3B-204ENST00000449510 ANAPC1Q9H1A4 1944 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 A0A1B0GTQ1 180 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 LOC390937A0A1W2PQ73 354 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 B4DEV8 164 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 EFNA2O43921 213 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 ZNF253O75346 499 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 AMBPP02760 352 aa10.68□□□□□ -0.7
UBE3B-204ENST00000449510 RPLP1P05386 114 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms