RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 HIST1H1AQ02539 215 aaPredicted RBP9.21□□□□□ -0.93
LINC00342-202ENST00000448494 CEACAM21Q3KPI0 293 aa9.21□□□□□ -0.93
LINC00342-202ENST00000448494 EMC4Q5J8M3 183 aa9.21□□□□□ -0.93
LINC00342-202ENST00000448494 TMEM164Q5U3C3 297 aa9.21□□□□□ -0.93
LINC00342-202ENST00000448494 SLC25A34Q6PIV7 304 aa9.21□□□□□ -0.93
LINC00342-202ENST00000448494 HAPLN4Q86UW8 402 aa9.21□□□□□ -0.93
LINC00342-202ENST00000448494 TSTD1Q8NFU3 115 aa9.21□□□□□ -0.93
LINC00342-202ENST00000448494 RTN4IP1Q8WWV3 396 aaPredicted RBP9.21□□□□□ -0.93
LINC00342-202ENST00000448494 ZNF689Q96CS4 500 aaPredicted RBP9.21□□□□□ -0.93
LINC00342-202ENST00000448494 NEIL1Q96FI4 390 aaPredicted RBP9.21□□□□□ -0.93
LINC00342-202ENST00000448494 SPIN2AQ99865 258 aa9.21□□□□□ -0.93
LINC00342-202ENST00000448494 SPIN2BQ9BPZ2 258 aa9.21□□□□□ -0.93
LINC00342-202ENST00000448494 STRADBQ9C0K7 418 aa9.21□□□□□ -0.93
LINC00342-202ENST00000448494 COMMD5Q9GZQ3 224 aa9.21□□□□□ -0.93
LINC00342-202ENST00000448494 WDR61Q9GZS3 305 aaKnown RBP9.21□□□□□ -0.93
LINC00342-202ENST00000448494 UBE2ZQ9H832 354 aaPredicted RBP9.21□□□□□ -0.93
LINC00342-202ENST00000448494 TMEM140Q9NV12 185 aa9.21□□□□□ -0.93
LINC00342-202ENST00000448494 TAAR3PQ9P1P4 343 aa9.21□□□□□ -0.93
LINC00342-202ENST00000448494 EML5Q05BV3 1969 aa9.21□□□□□ -0.93
LINC00342-202ENST00000448494 LOC107986453A0A1B0GWG9 222 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 H3BRM9 83 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 PLPP3O14495 311 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 FUT6P51993 359 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 TMEM50BP56557 158 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 PLAURQ03405 335 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 TBR1Q16650 682 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 ITPRIPL2Q3MIP1 535 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 KIAA1644Q3SXP7 199 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 SP6Q3SY56 376 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 SLC48A1Q6P1K1 146 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 ABHD17CQ6PCB6 329 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 Q6ZSR6 202 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 FA2HQ7L5A8 372 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 ODF3L1Q8IXM7 274 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 OR2K2Q8NGT1 345 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 SCGB1C1Q8TD33 95 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 PPP1R14AQ96A00 147 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 FNDC4Q9H6D8 234 aaPredicted RBP9.21□□□□□ -0.94
LINC00342-202ENST00000448494 CES1P1Q9UKY3 287 aa9.21□□□□□ -0.94
LINC00342-202ENST00000448494 BOKQ9UMX3 212 aaPredicted RBP9.21□□□□□ -0.94
LINC00342-202ENST00000448494 FCN1O00602 326 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 CST7O76096 145 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 ADH5P11766 374 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 PSEN2P49810 448 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 ABCA11PQ4W5N1 156 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 ZNF324BQ6AW86 544 aaPredicted RBP9.2□□□□□ -0.94
LINC00342-202ENST00000448494 KCTD18Q6PI47 426 aaPredicted RBP9.2□□□□□ -0.94
LINC00342-202ENST00000448494 PRRT2Q7Z6L0 340 aaPredicted RBP9.2□□□□□ -0.94
LINC00342-202ENST00000448494 LILRA3Q8N6C8 439 aaPredicted RBP9.2□□□□□ -0.94
LINC00342-202ENST00000448494 SCCPDHQ8NBX0 429 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 LHX4Q969G2 390 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 C16orf70Q9BSU1 422 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 TRAPPC2LQ9UL33 140 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 POLR2AP24928 1970 aaKnown RBP9.2□□□□□ -0.94
LINC00342-202ENST00000448494 EDDM13A0A1B0GTR0 161 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 SSSCA1O60232 199 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 MT-ND6P03923 174 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 C8orf89P0DMQ9 161 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 REG1BP48304 166 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 OR4N5Q8IXE1 308 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 OR4F5Q8NH21 305 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 ZNF418Q8TF45 676 aaPredicted RBP9.2□□□□□ -0.94
LINC00342-202ENST00000448494 SPSB4Q96A44 273 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 MBD6Q96DN6 1003 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 ARHGAP5-AS1Q96IT6 56 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 GNB1LQ9BYB4 327 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 METTL7AQ9H8H3 244 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 KCNIP1Q9NZI2 227 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 B9D1Q9UPM9 204 aa9.2□□□□□ -0.94
LINC00342-202ENST00000448494 TRIP12Q14669 1992 aaPredicted RBP9.19□□□□□ -0.94
LINC00342-202ENST00000448494 TEX48A0A1B0GUV7 120 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 DUSP11O75319 330 aaKnown RBP9.19□□□□□ -0.94
LINC00342-202ENST00000448494 RENP00797 406 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 ZNF20P17024 532 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 PGCP20142 388 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 ZNF157P51786 506 aaPredicted RBP9.19□□□□□ -0.94
LINC00342-202ENST00000448494 PLCXD2Q0VAA5 305 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 TAF10Q12962 218 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 CDCP2Q5VXM1 449 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 ZNF793Q6ZN11 406 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 CPEB2Q7Z5Q1 589 aaKnown RBP9.19□□□□□ -0.94
LINC00342-202ENST00000448494 ZNF721Q8TF20 911 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 RAB1CQ92928 201 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 RAX2Q96IS3 184 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 GPR82Q96P67 336 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 APOOQ9BUR5 198 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 SFXN3Q9BWM7 321 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 FAM206AQ9NX38 181 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 WNT16Q9UBV4 365 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 R4GMQ9 66 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.19□□□□□ -0.94
LINC00342-202ENST00000448494 CLEC3AO75596 197 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 MPIG6BO95866 241 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 GATA2P23769 480 aaPredicted RBP9.19□□□□□ -0.94
LINC00342-202ENST00000448494 SSTR5P35346 364 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 RPS27P42677 84 aaKnown RBP9.19□□□□□ -0.94
LINC00342-202ENST00000448494 GNG4P50150 75 aa9.19□□□□□ -0.94
LINC00342-202ENST00000448494 RPL24P83731 157 aaKnown RBP9.19□□□□□ -0.94
LINC00342-202ENST00000448494 ARF1P84077 181 aaKnown RBP9.19□□□□□ -0.94
LINC00342-202ENST00000448494 PSG4Q00888 419 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms