RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 LTB4R2Q9NPC1 389 aa7.9□□□□□ -1.15
NIPBL-202ENST00000448238 TNFSF18Q9UNG2 199 aa7.9□□□□□ -1.15
NIPBL-202ENST00000448238 ZNF257Q9Y2Q1 563 aa7.9□□□□□ -1.15
NIPBL-202ENST00000448238 PSMB11A5LHX3 300 aa7.9□□□□□ -1.15
NIPBL-202ENST00000448238 TDGF1P13385 188 aa7.9□□□□□ -1.15
NIPBL-202ENST00000448238 CST9LQ9H4G1 147 aa7.9□□□□□ -1.15
NIPBL-202ENST00000448238 NCOR1P1Q9H4R4 102 aa7.9□□□□□ -1.15
NIPBL-202ENST00000448238 PPT2Q9UMR5 302 aa7.9□□□□□ -1.15
NIPBL-202ENST00000448238 RRHO14718 337 aa7.9□□□□□ -1.15
NIPBL-202ENST00000448238 DSCR4P56555 118 aaPredicted RBP7.9□□□□□ -1.15
NIPBL-202ENST00000448238 CX3CL1P78423 397 aa7.9□□□□□ -1.15
NIPBL-202ENST00000448238 ADAMTSL4Q6UY14 1074 aa7.9□□□□□ -1.15
NIPBL-202ENST00000448238 BAHD1Q8TBE0 780 aaPredicted RBP7.9□□□□□ -1.15
NIPBL-202ENST00000448238 NTMQ9P121 344 aa7.9□□□□□ -1.15
NIPBL-202ENST00000448238 IGKV3D-11A0A0A0MRZ8 115 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 MEX3AA1L020 520 aaKnown RBP7.89□□□□□ -1.15
NIPBL-202ENST00000448238 TMPRSS2O15393 492 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 IGKV3-11P04433 115 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 CTAG1AP78358 180 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 SLC16A11Q8NCK7 471 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 PTPMT1Q8WUK0 201 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-202ENST00000448238 CCL17Q92583 94 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 RPRMQ9NS64 109 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 TRAV12-3A0A0B4J271 114 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 SIX1Q15475 284 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-202ENST00000448238 TM4SF18Q96CE8 201 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 MTCH2Q9Y6C9 303 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 CUL9Q8IWT3 2517 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 IGKV3OR2-268A0A0C4DH90 116 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 POLR2IP36954 125 aaKnown RBP7.89□□□□□ -1.15
NIPBL-202ENST00000448238 PPICP45877 212 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 ST3GAL2Q16842 350 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 TMEM177Q53S58 311 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 MORN3Q6PF18 240 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-202ENST00000448238 PUSL1Q8N0Z8 303 aaKnown RBP7.89□□□□□ -1.15
NIPBL-202ENST00000448238 GGTLC1Q9BX51 225 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 PLSCR2Q9NRY7 297 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 SLC6A13Q9NSD5 602 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 TRAV30A0A087WSZ9 112 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 IGHV3-64DA0A0J9YX35 117 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 FAM72CH0Y354 149 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 TSPAN2O60636 221 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 B4GALT1P15291 398 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 PRSS53Q2L4Q9 553 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 FAM72AQ5TYM5 149 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 FAM72DQ6L9T8 149 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 FAM72BQ86X60 149 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 TNFRSF14Q92956 283 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 RNF39Q9H2S5 420 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 ANKRD36A6QL64 1941 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 LEUTXA8MZ59 168 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 OR4D11Q8NGI4 311 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 CXXC4Q9H2H0 198 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 FSCN3Q9NQT6 498 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 TDRD15B5MCY1 1934 aaKnown RBP7.89□□□□□ -1.15
NIPBL-202ENST00000448238 COL5A2P05997 1499 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-202ENST00000448238 TRAV8-1A0A0A6YYK1 113 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 B4GALT3O60512 393 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 SCD5Q86SK9 330 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 NUBPLQ8TB37 319 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 MPC1Q9Y5U8 109 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 A0A1B0GW15 77 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 A0A1W2PP11 408 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 PTGER1P34995 402 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 TDGF1P3P51864 188 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 POLR2GP62487 172 aaKnown RBP eCLIP7.89□□□□□ -1.15
NIPBL-202ENST00000448238 SH2D5Q6ZV89 423 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 C1orf174Q8IYL3 243 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 OR4X2Q8NGF9 303 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 SLC26A1Q9H2B4 701 aa7.89□□□□□ -1.15
NIPBL-202ENST00000448238 TRBV20OR9-2A0A075B6H5 130 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 J3QR06 171 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 GCM2O75603 506 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-202ENST00000448238 KLKB1P03952 638 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 COX7A1P24310 79 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 CA7P43166 264 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 NAAAQ02083 359 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 COX20Q5RI15 118 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 OTOSQ8NHW6 89 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 DPM2O94777 84 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 FGF9P31371 208 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-202ENST00000448238 SLCO4C1Q6ZQN7 724 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 VGLL1Q99990 258 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 ZBP1Q9H171 429 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 KLK15Q9H2R5 256 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 RNF186Q9NXI6 227 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 LMO7Q8WWI1 1683 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 BGLAPP02818 100 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 GPX1P07203 203 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 HOXD9P28356 352 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-202ENST00000448238 RAE1P78406 368 aaKnown RBP7.88□□□□□ -1.15
NIPBL-202ENST00000448238 LINC01559Q495D7 138 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 FAM106AQ4KMX7 169 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 GAGE13Q4V321 117 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 FDCSPQ8NFU4 85 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 PDXPQ96GD0 296 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 IGKV3D-15A0A087WSY6 115 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 DXOO77932 396 aaKnown RBP7.88□□□□□ -1.15
NIPBL-202ENST00000448238 IGKV3-15P01624 115 aa7.88□□□□□ -1.15
NIPBL-202ENST00000448238 AGAP20933 346 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms