RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 LOC105371242A0A075B767 164 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 C2orf72A6NCS6 295 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 KLRC4-KLRK1H3BQV0 150 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 ST8SIA3O43173 380 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 NDUFB8O95169 186 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 UTS2O95399 124 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 HRASP01112 189 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 CELA3AP09093 270 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 BMP5P22003 454 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 IL12BP29460 328 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 MRPL49Q13405 166 aaKnown RBP11.23□□□□□ -0.61
DDX56-206ENST00000446987 ARL6IP1Q15041 203 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 MEP1BQ16820 701 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 TMEM251Q8N6I4 163 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 OR4C3Q8NH37 302 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 ANAPC16Q96DE5 110 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 KLHDC3Q9BQ90 382 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 NAT8Q9UHE5 227 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 SH3BGRL2Q9UJC5 107 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 HSF4Q9ULV5 492 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 LAMP3Q9UQV4 416 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 SLC22A13Q9Y226 551 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 MED12Q93074 2177 aa11.23□□□□□ -0.61
DDX56-206ENST00000446987 HIVEP3Q5T1R4 2406 aa11.22□□□□□ -0.61
DDX56-206ENST00000446987 NPIPA5A0A0B4J1W7 369 aa11.22□□□□□ -0.61
DDX56-206ENST00000446987 FAM166BA8MTA8 275 aa11.22□□□□□ -0.61
DDX56-206ENST00000446987 NPIPA7E9PJI5 369 aa11.22□□□□□ -0.61
DDX56-206ENST00000446987 ZNHIT1O43257 154 aa11.22□□□□□ -0.61
DDX56-206ENST00000446987 WDR1O75083 606 aa11.22□□□□□ -0.61
DDX56-206ENST00000446987 SRSF10O75494 262 aaKnown RBP11.22□□□□□ -0.61
DDX56-206ENST00000446987 NPIPA8P0DM63 369 aa11.22□□□□□ -0.61
DDX56-206ENST00000446987 BCL2P10415 239 aa11.22□□□□□ -0.61
DDX56-206ENST00000446987 MAGEA5P43359 124 aa11.22□□□□□ -0.61
DDX56-206ENST00000446987 CEBPGP53567 150 aa11.22□□□□□ -0.61
DDX56-206ENST00000446987 TPTE2P1Q5T6R2 138 aa11.22□□□□□ -0.61
DDX56-206ENST00000446987 ZNF880Q6PDB4 577 aa11.22□□□□□ -0.61
DDX56-206ENST00000446987 CYP2G1PQ6ZSU1 146 aa11.22□□□□□ -0.61
DDX56-206ENST00000446987 MRPL24Q96A35 216 aaKnown RBP11.22□□□□□ -0.61
DDX56-206ENST00000446987 SMIM12Q96EX1 92 aa11.22□□□□□ -0.61
DDX56-206ENST00000446987 VAMP8Q9BV40 100 aa11.22□□□□□ -0.61
DDX56-206ENST00000446987 GCN1Q92616 2671 aaKnown RBP11.21□□□□□ -0.61
DDX56-206ENST00000446987 TRAV30A0A087WSZ9 112 aa11.21□□□□□ -0.61
DDX56-206ENST00000446987 PNPP00491 289 aa11.21□□□□□ -0.61
DDX56-206ENST00000446987 DUSP1P28562 367 aa11.21□□□□□ -0.61
DDX56-206ENST00000446987 RPL19P84098 196 aaKnown RBP11.21□□□□□ -0.61
DDX56-206ENST00000446987 EWSR1Q01844 656 aaKnown RBP eCLIP11.21□□□□□ -0.61
DDX56-206ENST00000446987 C1orf140Q5VVS0 124 aa11.21□□□□□ -0.61
DDX56-206ENST00000446987 RTL6Q6ICC9 239 aa11.21□□□□□ -0.61
DDX56-206ENST00000446987 C16orf54Q6UWD8 224 aa11.21□□□□□ -0.61
DDX56-206ENST00000446987 CIB3Q96Q77 187 aaPredicted RBP11.21□□□□□ -0.61
DDX56-206ENST00000446987 C11orf1Q9H5F2 150 aa11.21□□□□□ -0.61
DDX56-206ENST00000446987 METTL7AQ9H8H3 244 aa11.21□□□□□ -0.61
DDX56-206ENST00000446987 COX11Q9Y6N1 276 aa11.21□□□□□ -0.61
DDX56-206ENST00000446987 R4GMQ9 66 aa11.21□□□□□ -0.61
DDX56-206ENST00000446987 FLNCQ14315 2725 aa11.21□□□□□ -0.61
DDX56-206ENST00000446987 GTF3C1Q12789 2109 aa11.21□□□□□ -0.61
DDX56-206ENST00000446987 FASNP49327 2511 aaKnown RBP11.21□□□□□ -0.61
DDX56-206ENST00000446987 OR5G3P0C626 314 aa11.21□□□□□ -0.62
DDX56-206ENST00000446987 PI3P19957 117 aa11.21□□□□□ -0.62
DDX56-206ENST00000446987 AMY2BP19961 511 aa11.21□□□□□ -0.62
DDX56-206ENST00000446987 DTYMKP23919 212 aa11.21□□□□□ -0.62
DDX56-206ENST00000446987 ARR3P36575 388 aa11.21□□□□□ -0.62
DDX56-206ENST00000446987 GALR1P47211 349 aa11.21□□□□□ -0.62
DDX56-206ENST00000446987 CD226Q15762 336 aa11.21□□□□□ -0.62
DDX56-206ENST00000446987 WDFY1Q8IWB7 410 aa11.21□□□□□ -0.62
DDX56-206ENST00000446987 ST6GALNAC3Q8NDV1 305 aa11.21□□□□□ -0.62
DDX56-206ENST00000446987 NUDT11Q96G61 164 aa11.21□□□□□ -0.62
DDX56-206ENST00000446987 TSSK2Q96PF2 358 aa11.21□□□□□ -0.62
DDX56-206ENST00000446987 LPAR5Q9H1C0 372 aa11.21□□□□□ -0.62
DDX56-206ENST00000446987 SRA1Q9HD15 236 aaKnown RBP11.21□□□□□ -0.62
DDX56-206ENST00000446987 KLRF1Q9NZS2 232 aa11.21□□□□□ -0.62
DDX56-206ENST00000446987 WIPI2Q9Y4P8 454 aa11.21□□□□□ -0.62
DDX56-206ENST00000446987 HEATR5AQ86XA9 2040 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 ESPL1Q14674 2120 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 ALG1L2C9J202 215 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 NPIPA5E9PKD4 350 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 MMP9P14780 707 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 GNLYP22749 145 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 TPPP2P59282 170 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 CTXN1P60606 82 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 RAB11AP62491 216 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 GNMTQ14749 295 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 ALG10Q5BKT4 473 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 TOMM20LQ6UXN7 152 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 MARCH3Q86UD3 253 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 FADS6Q8N9I5 356 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 AMELYQ99218 206 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 PARD6GQ9BYG4 376 aaPredicted RBP11.2□□□□□ -0.62
DDX56-206ENST00000446987 UQCR10Q9UDW1 63 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 RNF150Q9ULK6 438 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 BOKQ9UMX3 212 aaPredicted RBP11.2□□□□□ -0.62
DDX56-206ENST00000446987 NPIPA1Q9UND3 350 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 ST3GAL6Q9Y274 331 aa11.2□□□□□ -0.62
DDX56-206ENST00000446987 IGHV2OR16-5A0A0B4J2B6 119 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 A0A1B0GV50 99 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 LOC107986453A0A1B0GWG9 222 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 OR6C6A6NF89 314 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 NPIPA2E9PIF3 369 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 H7BYZ3 331 aa11.19□□□□□ -0.62
DDX56-206ENST00000446987 SCGB1D2O95969 90 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms