RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 Q9N2K0 584 aa11.46□□□□□ -0.57
SSBP3-208ENST00000444533 NDUFA13Q9P0J0 144 aa11.46□□□□□ -0.57
SSBP3-208ENST00000444533 ZNRD1Q9P1U0 126 aa11.46□□□□□ -0.57
SSBP3-208ENST00000444533 RSL24D1Q9UHA3 163 aaKnown RBP11.46□□□□□ -0.57
SSBP3-208ENST00000444533 PSG11Q9UQ72 335 aa11.46□□□□□ -0.57
SSBP3-208ENST00000444533 HILPDAQ9Y5L2 63 aa11.46□□□□□ -0.57
SSBP3-208ENST00000444533 IGHV3-43A0A0B4J1X8 118 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 TMEM235A6NFC5 223 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 DNAJC9-AS1A6NH13 148 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 OOSP1A8MZH6 123 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 H3BMQ9 156 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 BUB1B-PAK6H3BSN5 160 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 CLDN34H7C241 214 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 XRCC3O43542 346 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 IGHV3-7P01780 117 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 MELTFP08582 738 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 IGHV3-43DP0DP04 118 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 GDNFP39905 211 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 CBX5P45973 191 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 SPCS2Q15005 226 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 AANATQ16613 207 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 OLFML2AQ68BL7 652 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 ZNF880Q6PDB4 577 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 LHFPL4Q7Z7J7 247 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 C8orf31Q8N9H6 132 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 OR2AK2Q8NG84 335 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 OR10V1Q8NGI7 309 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 OR4A4PQ8NGN8 299 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 LEAP2Q969E1 77 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 TOMM40LQ969M1 308 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 ZNF48Q96MX3 618 aaPredicted RBP11.45□□□□□ -0.58
SSBP3-208ENST00000444533 SSX3Q99909 188 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 ST6GALNAC5Q9BVH7 336 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 MEGF9Q9H1U4 602 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 TNFRSF19Q9NS68 423 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 CCDC59Q9P031 241 aaKnown RBP11.45□□□□□ -0.58
SSBP3-208ENST00000444533 SLC23A1Q9UHI7 598 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 KCNK7Q9Y2U2 307 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 SVEP1Q4LDE5 3571 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 JMJD1CQ15652 2540 aa11.45□□□□□ -0.58
SSBP3-208ENST00000444533 ZNF701M0R085 212 aaPredicted RBP11.44□□□□□ -0.58
SSBP3-208ENST00000444533 YPEL1O60688 119 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 VENTXO95231 258 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 IGLV1-47P01700 117 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 IER3P46695 156 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 RAB7AP51149 207 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 LOXL3P58215 753 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 UBA52P62987 128 aaKnown RBP11.44□□□□□ -0.58
SSBP3-208ENST00000444533 SRSF7Q16629 238 aaKnown RBP eCLIP11.44□□□□□ -0.58
SSBP3-208ENST00000444533 ZNF260Q3ZCT1 412 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 BAIAP2L2Q6UXY1 529 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 OR4P4Q8NGL7 312 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 OR10J5Q8NHC4 309 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 C15orf40Q8WUR7 153 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 EDARADDQ8WWZ3 215 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 DUX5Q96PT3 197 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 YPEL2Q96QA6 119 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 OCSTAMPQ9BR26 566 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 GINS4Q9BRT9 223 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 RAB18Q9NP72 206 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 IFT46Q9NQC8 304 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 PITPNC1Q9UKF7 332 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 SOX21Q9Y651 276 aaPredicted RBP11.44□□□□□ -0.58
SSBP3-208ENST00000444533 CEPT1Q9Y6K0 416 aa11.44□□□□□ -0.58
SSBP3-208ENST00000444533 FABP7O15540 132 aa11.43□□□□□ -0.58
SSBP3-208ENST00000444533 HPGDSO60760 199 aa11.43□□□□□ -0.58
SSBP3-208ENST00000444533 CTXN2P0C2S0 81 aa11.43□□□□□ -0.58
SSBP3-208ENST00000444533 ACTG1P63261 375 aa11.43□□□□□ -0.58
SSBP3-208ENST00000444533 SLC9A3R2Q15599 337 aa11.43□□□□□ -0.58
SSBP3-208ENST00000444533 MORN2Q502X0 79 aa11.43□□□□□ -0.58
SSBP3-208ENST00000444533 PLA1AQ53H76 456 aa11.43□□□□□ -0.58
SSBP3-208ENST00000444533 TPTE2P1Q5T6R2 138 aa11.43□□□□□ -0.58
SSBP3-208ENST00000444533 IZUMO1Q8IYV9 350 aa11.43□□□□□ -0.58
SSBP3-208ENST00000444533 LINC00311Q8N616 119 aa11.43□□□□□ -0.58
SSBP3-208ENST00000444533 OR52L2PQ8NGH6 319 aa11.43□□□□□ -0.58
SSBP3-208ENST00000444533 FAM216AQ8WUB2 273 aa11.43□□□□□ -0.58
SSBP3-208ENST00000444533 NUDCD2Q8WVJ2 157 aa11.43□□□□□ -0.58
SSBP3-208ENST00000444533 CAPSLQ8WWF8 208 aa11.43□□□□□ -0.58
SSBP3-208ENST00000444533 ABHD14AQ9BUJ0 271 aa11.43□□□□□ -0.58
SSBP3-208ENST00000444533 GHITMQ9H3K2 345 aa11.43□□□□□ -0.58
SSBP3-208ENST00000444533 MRPS7Q9Y2R9 242 aaKnown RBP11.43□□□□□ -0.58
SSBP3-208ENST00000444533 ZFHX3Q15911 3703 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 RNF212BA8MTL3 300 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 H3BUX3 64 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 BET1O15155 118 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 TXNL1O43396 289 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 DIRAS3O95661 229 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 IGHV4-59P01825 116 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 GAPDHP04406 335 aaKnown RBP11.42□□□□□ -0.58
SSBP3-208ENST00000444533 RNASE1P07998 156 aaKnown RBP11.42□□□□□ -0.58
SSBP3-208ENST00000444533 SCTP09683 121 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 PRSS3P35030 304 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 PPP1CCP36873 323 aaKnown RBP11.42□□□□□ -0.58
SSBP3-208ENST00000444533 CEACAM6P40199 344 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 TAS2R20P59543 309 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 ARPC4P59998 168 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 RPL15P61313 204 aaKnown RBP11.42□□□□□ -0.58
SSBP3-208ENST00000444533 TUSC1Q2TAM9 212 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 LY6G6FQ5SQ64 297 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 C16orf87Q6PH81 154 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms