RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 PHF1O43189 567 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 HTR3BO95264 441 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 CYB5R3P00387 301 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 COX5BP10606 129 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 MUC1P15941 1255 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 MPV17P39210 176 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 HOXA1P49639 335 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 CAV2P51636 162 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 GNG3P63215 75 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 PSG7Q13046 419 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 TMEM42Q69YG0 159 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 DHRS11Q6UWP2 260 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 C22orf34Q6ZV56 151 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 TMEM17Q86X19 198 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 ZNF573Q86YE8 665 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 LRTM2Q8N967 370 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 OR5D18Q8NGL1 313 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 SAT2Q96F10 170 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 JMJD8Q96S16 334 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 NRIP2Q9BQI9 281 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 UQCC1Q9NVA1 299 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 HSF4Q9ULV5 492 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 BSNQ9UPA5 3926 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 METTL21EPA6NDL7 271 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 GPM6AP51674 278 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 TAS2R31P59538 309 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 RBM39Q14498 530 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 TMEM249Q2WGJ8 235 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 ACTBL2Q562R1 376 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 CBLN2Q8IUK8 224 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 LRRC75A-AS1Q8N1F1 130 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 NUP37Q8NFH4 326 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 NANPQ8TBE9 248 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 BSCL2Q96G97 398 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 POM121L2Q96KW2 1035 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 Q96M66 194 aa6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 MRPS28Q9Y2Q9 187 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-208ENST00000442054 CRYM-AS1A6NIL9 109 aa6.21□□□□□ -1.41
CDC42BPA-208ENST00000442054 DHRS7CA6NNS2 312 aa6.21□□□□□ -1.41
CDC42BPA-208ENST00000442054 FAHP16930 419 aa6.21□□□□□ -1.41
CDC42BPA-208ENST00000442054 SULT1A2P50226 295 aa6.21□□□□□ -1.41
CDC42BPA-208ENST00000442054 LTC4SQ16873 150 aa6.21□□□□□ -1.41
CDC42BPA-208ENST00000442054 KHDC1LQ5JSQ8 128 aa6.21□□□□□ -1.41
CDC42BPA-208ENST00000442054 Q8NFD4 153 aa6.21□□□□□ -1.41
CDC42BPA-208ENST00000442054 EMG1Q92979 244 aaKnown RBP6.21□□□□□ -1.41
CDC42BPA-208ENST00000442054 HIPK2Q9H2X6 1198 aa6.21□□□□□ -1.41
CDC42BPA-208ENST00000442054 TAS2R3Q9NYW6 316 aa6.21□□□□□ -1.41
CDC42BPA-208ENST00000442054 CACFD1Q9UGQ2 172 aa6.21□□□□□ -1.41
CDC42BPA-208ENST00000442054 CDC42EP3Q9UKI2 254 aa6.21□□□□□ -1.41
CDC42BPA-208ENST00000442054 KMT2BQ9UMN6 2715 aaPredicted RBP6.21□□□□□ -1.41
CDC42BPA-208ENST00000442054 LOC100509620A0A075B734 347 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 INAFM1C9JVW0 142 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 IFNL4K9M1U5 179 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 HSPA12AO43301 675 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 DEDDO75618 318 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 GLAP06280 429 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 CD80P33681 288 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 PPOXP50336 477 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 POLR2GP62487 172 aaKnown RBP eCLIP6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 PJVKQ0ZLH3 352 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 PRDX4Q13162 271 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 SMIM21Q3B7S5 101 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 IL17RELQ6ZVW7 336 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 DOK3Q7L591 496 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 LINC01356Q8N9X3 169 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 KCNG3Q8TAE7 436 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 WFDC1Q9HC57 220 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 MIOXQ9UGB7 285 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 MALRD1Q5VYJ5 2156 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 GAPDHP04406 335 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 COL8A2P25067 703 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 MDH2P40926 338 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 PTGFRP43088 359 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 RAB32Q13637 225 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 HABP2Q14520 560 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 LRRC37A5PQ49AS3 106 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 FAM169BQ8N8A8 192 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 CHST4Q8NCG5 386 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 RAB3CQ96E17 227 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 NEIL1Q96FI4 390 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 ZNF471Q9BX82 626 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 CHST5Q9GZS9 411 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 WIPI2Q9Y4P8 454 aa6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 SETD2Q9BYW2 2564 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-208ENST00000442054 RCC1P18754 421 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 PMELP40967 661 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 KCNJ3P48549 501 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 NPY4RP50391 375 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 KISS1Q15726 138 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 C9orf152Q5JTZ5 239 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 AWAT2Q6E213 333 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 FAM219AQ8IW50 185 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 GLYATL2Q8WU03 294 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 MARS2Q96GW9 593 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 C2orf50Q96LR7 162 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 TSNAXQ99598 290 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 BANF2Q9H503 90 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 GHRLQ9UBU3 117 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 MPC1Q9Y5U8 109 aa6.2□□□□□ -1.42
CDC42BPA-208ENST00000442054 IGHV3OR15-7A0A075B7D8 119 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms