RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 RSBN1Q5VWQ0 802 aaPredicted RBP3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 SPATA31B1PQ5VZV4 182 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 STEAP4Q687X5 459 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 Q6ZN92 141 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 FA2HQ7L5A8 372 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 PRSS41Q7RTY9 318 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 PDZD9Q8IXQ8 264 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 C11orf42Q8N5U0 333 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR2G2Q8NGZ5 317 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 ASB13Q8WXK3 278 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 RBPMSQ93062 196 aaKnown RBP3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 EEF1AKMT3Q96AZ1 226 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 DDIT4LQ96D03 193 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 SLC25A38Q96DW6 304 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZMYND19Q96E35 227 aaPredicted RBP3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 GPR82Q96P67 336 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZNF649Q9BS31 505 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 AGMATQ9BSE5 352 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 NDFIP1Q9BT67 221 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 SNX10Q9Y5X0 201 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 HCFC1P51610 2035 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 NOTCH4Q99466 2003 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 INO80Q9ULG1 1556 aaPredicted RBP3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 ERVK-7P63135 1459 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 TCF20Q9UGU0 1960 aaKnown RBP3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 MYH13Q9UKX3 1938 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 FOCADQ5VW36 1801 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 A0A087WYN8 130 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZNF726A6NNF4 738 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 K7N7A8 449 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 EDIL3O43854 480 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 GCM2O75603 506 aaPredicted RBP3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 SULT1A3P0DMM9 295 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 SULT1A4P0DMN0 295 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 RAB3BP20337 219 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 SLC2A5P22732 501 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 AQP1P29972 269 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 TFPI2P48307 235 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 KLK7P49862 253 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 SSR4P51571 173 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 MRPS10P82664 201 aaKnown RBP3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 ST3GAL4Q11206 333 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 UNC119Q13432 240 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 QPRTQ15274 297 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 FCN2Q15485 313 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 Q5BKY6 102 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 PYY3Q5JQD4 70 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 TPTE2P1Q5T6R2 138 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 FAAP20Q6NZ36 180 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 BHLHA9Q7RTU4 235 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 HSD17B13Q7Z5P4 300 aaPredicted RBP3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 PNKDQ8N490 385 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR9I1Q8NGQ6 314 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZNRF2Q8NHG8 242 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 SLC37A2Q8TED4 501 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 TP53RKQ96S44 253 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 EBPLQ9BY08 206 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 VSIRQ9H7M9 311 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 CACYBPQ9HB71 228 aaKnown RBP3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 MED29Q9NX70 200 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 V9GY05 133 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 LMTK2Q8IWU2 1503 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 IGHV1OR15-1A0A075B7D0 117 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 LOC102724200A0A096LPH7 203 aaPredicted RBP3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 LOC100130705A0A1B0GUX0 176 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 CIB4A0PJX0 185 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 USP27XA6NNY8 438 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 KRTAP29-1A8MX34 341 aaPredicted RBP3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 H7C417 338 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR7C2O60412 319 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 RPL7P18124 248 aaKnown RBP3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 PRTN3P24158 256 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 CD34P28906 385 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 GNG5P63218 68 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 HBA1P69905 142 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 HIST1H1AQ02539 215 aaPredicted RBP3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZNF763Q0D2J5 394 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 HTR4Q13639 388 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 TGIF1Q15583 401 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZNF726P1Q15940 193 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 AKR1C8PQ5T2L2 129 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 AVPI1Q5T686 147 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 RUSC1-AS1Q66K80 236 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 SPICQ8N5J4 248 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR5K1Q8NHB7 308 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 PIFOQ8TCI5 191 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 DOK4Q8TEW6 326 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 CYGBQ8WWM9 190 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 ARPC1AQ92747 370 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 RDH5Q92781 318 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 ARL11Q969Q4 196 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 CMBLQ96DG6 245 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 RARRES2Q99969 163 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 PDCD1LG2Q9BQ51 273 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 NKX6-2Q9C056 277 aaPredicted RBP3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 RNASE7Q9H1E1 156 aaKnown RBP3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 C20orf85Q9H1P6 137 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 SRMSQ9H3Y6 488 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 FBXL15Q9H469 300 aa3.12□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZDHHC11Q9H8X9 412 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms