RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 RNF223E7ERA6 249 aa17.32■□□□□ 0.36
VPS13B-204ENST00000441350 ENSAO43768 121 aaKnown RBP17.32■□□□□ 0.36
VPS13B-204ENST00000441350 GNMTQ14749 295 aa17.32■□□□□ 0.36
VPS13B-204ENST00000441350 SCGB2B2Q4G0G5 96 aa17.32■□□□□ 0.36
VPS13B-204ENST00000441350 PRAMEF5Q5TYX0 476 aa17.32■□□□□ 0.36
VPS13B-204ENST00000441350 AADACL3Q5VUY0 350 aa17.32■□□□□ 0.36
VPS13B-204ENST00000441350 FAM53AQ6NSI3 398 aaPredicted RBP17.32■□□□□ 0.36
VPS13B-204ENST00000441350 IDO2Q6ZQW0 420 aa17.32■□□□□ 0.36
VPS13B-204ENST00000441350 DUSP18Q8NEJ0 188 aa17.32■□□□□ 0.36
VPS13B-204ENST00000441350 OR13C8Q8NGS7 320 aa17.32■□□□□ 0.36
VPS13B-204ENST00000441350 TERB2Q8NHR7 220 aa17.32■□□□□ 0.36
VPS13B-204ENST00000441350 MRGPRFQ96AM1 343 aa17.32■□□□□ 0.36
VPS13B-204ENST00000441350 ZNF2Q9BSG1 426 aaPredicted RBP17.32■□□□□ 0.36
VPS13B-204ENST00000441350 OCEL1Q9H607 264 aa17.32■□□□□ 0.36
VPS13B-204ENST00000441350 JPT1Q9UK76 154 aa17.32■□□□□ 0.36
VPS13B-204ENST00000441350 CSMD1Q96PZ7 3565 aa17.31■□□□□ 0.36
VPS13B-204ENST00000441350 BAHCC1Q9P281 2608 aa17.31■□□□□ 0.36
VPS13B-204ENST00000441350 IGHV2-70DA0A0C4DH43 119 aa17.31■□□□□ 0.36
VPS13B-204ENST00000441350 HSPA12AO43301 675 aa17.31■□□□□ 0.36
VPS13B-204ENST00000441350 RBP4P02753 201 aa17.31■□□□□ 0.36
VPS13B-204ENST00000441350 CEACAM6P40199 344 aa17.31■□□□□ 0.36
VPS13B-204ENST00000441350 ERVFRD-1P60508 538 aa17.31■□□□□ 0.36
VPS13B-204ENST00000441350 LTC4SQ16873 150 aa17.31■□□□□ 0.36
VPS13B-204ENST00000441350 ENKURQ8TC29 256 aa17.31■□□□□ 0.36
VPS13B-204ENST00000441350 DPAGT1Q9H3H5 408 aa17.31■□□□□ 0.36
VPS13B-204ENST00000441350 MMP26Q9NRE1 261 aa17.31■□□□□ 0.36
VPS13B-204ENST00000441350 GFOD1Q9NXC2 390 aa17.31■□□□□ 0.36
VPS13B-204ENST00000441350 IGHV3-43A0A0B4J1X8 118 aa17.3■□□□□ 0.36
VPS13B-204ENST00000441350 IGHV3-43DP0DP04 118 aa17.3■□□□□ 0.36
VPS13B-204ENST00000441350 AADACP22760 399 aa17.3■□□□□ 0.36
VPS13B-204ENST00000441350 OXA1LQ15070 435 aa17.3■□□□□ 0.36
VPS13B-204ENST00000441350 GLCCI1Q86VQ1 547 aa17.3■□□□□ 0.36
VPS13B-204ENST00000441350 WFDC11Q8NEX6 87 aa17.3■□□□□ 0.36
VPS13B-204ENST00000441350 RDH8Q9NYR8 311 aa17.3■□□□□ 0.36
VPS13B-204ENST00000441350 GNG12Q9UBI6 72 aa17.3■□□□□ 0.36
VPS13B-204ENST00000441350 ZNF69Q9UC07 566 aa17.3■□□□□ 0.36
VPS13B-204ENST00000441350 OR5H14A6NHG9 310 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 YPEL1O60688 119 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 NDUFB6O95139 128 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 PPYP01298 95 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 SPNP16150 400 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 PPP1CCP36873 323 aaKnown RBP17.29■□□□□ 0.36
VPS13B-204ENST00000441350 MORN2Q502X0 79 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 UTF1Q5T230 341 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 KIR3DL3Q8N743 410 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 CHPT1Q8WUD6 406 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 MOB3AQ96BX8 217 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 YPEL2Q96QA6 119 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 PARP12Q9H0J9 701 aaKnown RBP17.29■□□□□ 0.36
VPS13B-204ENST00000441350 COPZ2Q9P299 210 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 OR2W1Q9Y3N9 320 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 M0R1W7 72 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 IGHV1-8P0DP01 117 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 RBMS2Q15434 407 aaKnown RBP17.29■□□□□ 0.36
VPS13B-204ENST00000441350 LY6G6FQ5SQ64 297 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 C1orf122Q6ZSJ8 110 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 Q8N7P7 452 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 OR10V1Q8NGI7 309 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 SLC25A21Q9BQT8 299 aaPredicted RBP17.29■□□□□ 0.36
VPS13B-204ENST00000441350 ONECUT1Q9UBC0 465 aa17.29■□□□□ 0.36
VPS13B-204ENST00000441350 CR1P17927 2039 aa17.28■□□□□ 0.36
VPS13B-204ENST00000441350 TCRBP04435 133 aa17.28■□□□□ 0.36
VPS13B-204ENST00000441350 NFYBP25208 207 aa17.28■□□□□ 0.36
VPS13B-204ENST00000441350 ARF6P62330 175 aa17.28■□□□□ 0.36
VPS13B-204ENST00000441350 LPAR2Q9HBW0 351 aa17.28■□□□□ 0.36
VPS13B-204ENST00000441350 A0A087X0M5 115 aa17.27■□□□□ 0.36
VPS13B-204ENST00000441350 A0A1B0GX30 115 aa17.27■□□□□ 0.36
VPS13B-204ENST00000441350 hCG_1809904A0A1W2PP81 198 aa17.27■□□□□ 0.36
VPS13B-204ENST00000441350 A0A1W2PPE2 198 aa17.27■□□□□ 0.36
VPS13B-204ENST00000441350 A0A1W2PR64 198 aa17.27■□□□□ 0.36
VPS13B-204ENST00000441350 A0A1W2PRV1 198 aa17.27■□□□□ 0.36
VPS13B-204ENST00000441350 B4DSR2 109 aa17.27■□□□□ 0.36
VPS13B-204ENST00000441350 MSMBP08118 114 aa17.27■□□□□ 0.36
VPS13B-204ENST00000441350 HERV-K104P61576 105 aa17.27■□□□□ 0.36
VPS13B-204ENST00000441350 CCBE1Q6UXH8 406 aaPredicted RBP17.27■□□□□ 0.36
VPS13B-204ENST00000441350 LDLRAD3Q86YD5 345 aa17.27■□□□□ 0.36
VPS13B-204ENST00000441350 FXYD6Q9H0Q3 95 aa17.27■□□□□ 0.36
VPS13B-204ENST00000441350 KPTNQ9Y664 436 aa17.27■□□□□ 0.36
VPS13B-204ENST00000441350 SESN1Q9Y6P5 492 aa17.27■□□□□ 0.36
VPS13B-204ENST00000441350 FLNBO75369 2602 aaKnown RBP17.27■□□□□ 0.35
VPS13B-204ENST00000441350 IGKV1D-13A0A0B4J2D9 117 aa17.26■□□□□ 0.35
VPS13B-204ENST00000441350 FAM172BPA6NC97 362 aa17.26■□□□□ 0.35
VPS13B-204ENST00000441350 RGS11O94810 467 aa17.26■□□□□ 0.35
VPS13B-204ENST00000441350 IGKV1-13P0DP09 117 aa17.26■□□□□ 0.35
VPS13B-204ENST00000441350 TRIM16LQ309B1 348 aa17.26■□□□□ 0.35
VPS13B-204ENST00000441350 CENPSQ8N2Z9 138 aa17.26■□□□□ 0.35
VPS13B-204ENST00000441350 MINDY2Q8NBR6 621 aa17.26■□□□□ 0.35
VPS13B-204ENST00000441350 ZNF439Q8NDP4 499 aa17.26■□□□□ 0.35
VPS13B-204ENST00000441350 MARCH1Q8TCQ1 289 aa17.26■□□□□ 0.35
VPS13B-204ENST00000441350 INSIG2Q9Y5U4 225 aa17.26■□□□□ 0.35
VPS13B-204ENST00000441350 WNK2Q9Y3S1 2297 aa17.26■□□□□ 0.35
VPS13B-204ENST00000441350 ITPR3Q14573 2671 aa17.26■□□□□ 0.35
VPS13B-204ENST00000441350 AKAP9Q99996 3911 aa17.26■□□□□ 0.35
VPS13B-204ENST00000441350 ITGB1BP1O14713 200 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 DVL1P1P54792 670 aaPredicted RBP17.25■□□□□ 0.35
VPS13B-204ENST00000441350 UCP3P55916 312 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 FXYD4P59646 89 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 MAPK1IP1LQ8NDC0 245 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 EDARADDQ8WWZ3 215 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 LEAP2Q969E1 77 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms