RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 DTYMKP23919 212 aa12.05□□□□□ -0.48
LIMD1-202ENST00000440097 UNQ6494/PRO21346Q6UXR6 183 aa12.05□□□□□ -0.48
LIMD1-202ENST00000440097 TMEM182Q6ZP80 229 aaPredicted RBP12.05□□□□□ -0.48
LIMD1-202ENST00000440097 EXTL1Q92935 676 aa12.05□□□□□ -0.48
LIMD1-202ENST00000440097 NSG2Q9Y328 171 aa12.05□□□□□ -0.48
LIMD1-202ENST00000440097 STRAPQ9Y3F4 350 aaKnown RBP12.05□□□□□ -0.48
LIMD1-202ENST00000440097 DIRAS3O95661 229 aa12.05□□□□□ -0.48
LIMD1-202ENST00000440097 FGF12P61328 243 aa12.05□□□□□ -0.48
LIMD1-202ENST00000440097 GAMTQ14353 236 aa12.05□□□□□ -0.48
LIMD1-202ENST00000440097 SURF2Q15527 256 aaPredicted RBP12.05□□□□□ -0.48
LIMD1-202ENST00000440097 INO80CQ6PI98 192 aaPredicted RBP12.05□□□□□ -0.48
LIMD1-202ENST00000440097 CXorf67Q86X51 503 aaPredicted RBP12.05□□□□□ -0.48
LIMD1-202ENST00000440097 C17orf78Q8N4C9 275 aa12.05□□□□□ -0.48
LIMD1-202ENST00000440097 SLC25A40Q8TBP6 338 aa12.05□□□□□ -0.48
LIMD1-202ENST00000440097 Q8WTZ3 238 aa12.05□□□□□ -0.48
LIMD1-202ENST00000440097 RCL1Q9Y2P8 373 aaKnown RBP12.05□□□□□ -0.48
LIMD1-202ENST00000440097 URGCP-MRPS24S4R325 110 aa12.05□□□□□ -0.48
LIMD1-202ENST00000440097 OR5B21A6NL26 309 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 HS3ST1O14792 307 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 WDR1O75083 606 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 CEBPGP53567 150 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 IGFL3Q6UXB1 125 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 RAB39BQ96DA2 213 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 GPR61Q9BZJ8 451 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 PLSCR2Q9NRY7 297 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 ZDHHC8Q9ULC8 765 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 KALRNO60229 2985 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 SEC14L6B5MCN3 397 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 H3BQ15 152 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 GPR137BO60478 399 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 HIST1H2BKO60814 126 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 HIST1H2BJP06899 126 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 SOD3P08294 240 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 NDUFB7P17568 137 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 HIST1H2BOP23527 126 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 HIST1H2BBP33778 126 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 TAGLN2P37802 199 aaKnown RBP12.04□□□□□ -0.48
LIMD1-202ENST00000440097 HIST1H2BDP58876 126 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 HIST1H2BCP62807 126 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 ELOBQ15370 118 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 HIST2H2BEQ16778 126 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.04□□□□□ -0.48
LIMD1-202ENST00000440097 HIST1H2BHQ93079 126 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 HIST1H2BNQ99877 126 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 HIST1H2BMQ99879 126 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 PRO1933Q9H354 126 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 DKK4Q9UBT3 224 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 ESPL1Q14674 2120 aa12.04□□□□□ -0.48
LIMD1-202ENST00000440097 CRYM-AS1A6NIL9 109 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 MKRN2OSH3BPM6 223 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 CCL20P78556 96 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 GUSBP1Q15486 140 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 SP6Q3SY56 376 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 ABCA11PQ4W5N1 156 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 Q6ZS92 163 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 REC114Q7Z4M0 266 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 RTL8AQ9BWD3 113 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 RFNGQ9Y644 331 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 TGIF2-C20orf24A0A0A6YYL0 155 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 RHBDL1O75783 438 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 CNOT4O95628 575 aaKnown RBP12.03□□□□□ -0.48
LIMD1-202ENST00000440097 NHLH2Q02577 135 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 DAZAP2Q15038 168 aaPredicted RBP12.03□□□□□ -0.48
LIMD1-202ENST00000440097 ZNF124Q15973 351 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 KHDC3LQ587J8 217 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 SAXO1Q8IYX7 474 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 RDH5Q92781 318 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 LIME1Q9H400 295 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 FZR1Q9UM11 496 aa12.03□□□□□ -0.48
LIMD1-202ENST00000440097 A0A1B0GW64 132 aa12.02□□□□□ -0.48
LIMD1-202ENST00000440097 SLC31A2O15432 143 aa12.02□□□□□ -0.48
LIMD1-202ENST00000440097 GRPP07492 148 aa12.02□□□□□ -0.48
LIMD1-202ENST00000440097 ASCL1P50553 236 aa12.02□□□□□ -0.48
LIMD1-202ENST00000440097 ERVFRD-1P60508 538 aa12.02□□□□□ -0.48
LIMD1-202ENST00000440097 ALKBH6Q3KRA9 238 aa12.02□□□□□ -0.48
LIMD1-202ENST00000440097 FIP1L1Q6UN15 594 aaKnown RBP12.02□□□□□ -0.48
LIMD1-202ENST00000440097 C5orf24Q7Z6I8 188 aa12.02□□□□□ -0.48
LIMD1-202ENST00000440097 HIST3H2BBQ8N257 126 aa12.02□□□□□ -0.48
LIMD1-202ENST00000440097 RBMXL3Q8N7X1 1067 aaKnown RBP12.02□□□□□ -0.48
LIMD1-202ENST00000440097 LFNGQ8NES3 379 aa12.02□□□□□ -0.48
LIMD1-202ENST00000440097 OBP2BQ9NPH6 170 aa12.02□□□□□ -0.48
LIMD1-202ENST00000440097 H0YL77 283 aa12.02□□□□□ -0.49
LIMD1-202ENST00000440097 K7N7A8 449 aa12.02□□□□□ -0.49
LIMD1-202ENST00000440097 PPP1R2P9O14990 202 aa12.02□□□□□ -0.49
LIMD1-202ENST00000440097 TNFSF13O75888 250 aa12.02□□□□□ -0.49
LIMD1-202ENST00000440097 CTSDP07339 412 aaPredicted RBP12.02□□□□□ -0.49
LIMD1-202ENST00000440097 ZNF728P0DKX0 622 aa12.02□□□□□ -0.49
LIMD1-202ENST00000440097 GLI4P10075 376 aa12.02□□□□□ -0.49
LIMD1-202ENST00000440097 DDTP30046 118 aa12.02□□□□□ -0.49
LIMD1-202ENST00000440097 UBE2KP61086 200 aa12.02□□□□□ -0.49
LIMD1-202ENST00000440097 HAGHQ16775 308 aa12.02□□□□□ -0.49
LIMD1-202ENST00000440097 FBXW12Q6X9E4 464 aa12.02□□□□□ -0.49
LIMD1-202ENST00000440097 RPRMLQ8N4K4 120 aa12.02□□□□□ -0.49
LIMD1-202ENST00000440097 STARD4Q96DR4 205 aa12.02□□□□□ -0.49
LIMD1-202ENST00000440097 TMED3Q9Y3Q3 217 aa12.02□□□□□ -0.49
LIMD1-202ENST00000440097 ZFYVE26Q68DK2 2539 aa12.02□□□□□ -0.49
LIMD1-202ENST00000440097 RBFOX3A6NFN3 312 aa12.01□□□□□ -0.49
LIMD1-202ENST00000440097 RRP8O43159 456 aaKnown RBP12.01□□□□□ -0.49
LIMD1-202ENST00000440097 CRYABP02511 175 aaKnown RBP12.01□□□□□ -0.49
LIMD1-202ENST00000440097 COX5AP20674 150 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms