RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 OR2S2Q9NQN1 319 aa10.4□□□□□ -0.74
SCLT1-202ENST00000439369 SLC2A8Q9NY64 477 aa10.4□□□□□ -0.74
SCLT1-202ENST00000439369 EHFQ9NZC4 300 aa10.4□□□□□ -0.74
SCLT1-202ENST00000439369 GNG12Q9UBI6 72 aa10.4□□□□□ -0.74
SCLT1-202ENST00000439369 DISC1C4P0D8 188 aa10.39□□□□□ -0.75
SCLT1-202ENST00000439369 BET1O15155 118 aa10.39□□□□□ -0.75
SCLT1-202ENST00000439369 TUSC2O75896 110 aa10.39□□□□□ -0.75
SCLT1-202ENST00000439369 TOX4O94842 621 aa10.39□□□□□ -0.75
SCLT1-202ENST00000439369 TGFAP01135 160 aa10.39□□□□□ -0.75
SCLT1-202ENST00000439369 DEFA1P59665 94 aa10.39□□□□□ -0.75
SCLT1-202ENST00000439369 DEFA3P59666 94 aa10.39□□□□□ -0.75
SCLT1-202ENST00000439369 DCTN2Q13561 401 aaKnown RBP10.39□□□□□ -0.75
SCLT1-202ENST00000439369 H1FOOQ8IZA3 346 aaPredicted RBP10.39□□□□□ -0.75
SCLT1-202ENST00000439369 CIARTQ8N365 385 aaPredicted RBP10.39□□□□□ -0.75
SCLT1-202ENST00000439369 MAPK1IP1LQ8NDC0 245 aa10.39□□□□□ -0.75
SCLT1-202ENST00000439369 OR13D1Q8NGV5 346 aa10.39□□□□□ -0.75
SCLT1-202ENST00000439369 OR6F1Q8NGZ6 308 aa10.39□□□□□ -0.75
SCLT1-202ENST00000439369 C18orf12Q96KH6 178 aa10.39□□□□□ -0.75
SCLT1-202ENST00000439369 PRRT1Q99946 306 aa10.39□□□□□ -0.75
SCLT1-202ENST00000439369 GHITMQ9H3K2 345 aa10.39□□□□□ -0.75
SCLT1-202ENST00000439369 ABCB10Q9NRK6 738 aa10.39□□□□□ -0.75
SCLT1-202ENST00000439369 ZNF69Q9UC07 566 aa10.39□□□□□ -0.75
SCLT1-202ENST00000439369 DOCK11Q5JSL3 2073 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 CR1P17927 2039 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 MEX3AA1L020 520 aaKnown RBP10.38□□□□□ -0.75
SCLT1-202ENST00000439369 M0QYG6 137 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 MMP23AO75900 390 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 PMP2P02689 132 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 FCER2P06734 321 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 OMGP23515 440 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 ECI1P42126 302 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 RFX2P48378 723 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 RAB7AP51149 207 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 ASAH1Q13510 395 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 MORN2Q502X0 79 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 ZNF660Q6AZW8 331 aaPredicted RBP10.38□□□□□ -0.75
SCLT1-202ENST00000439369 C16orf87Q6PH81 154 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 LINC00311Q8N616 119 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 OR11H6Q8NGC7 330 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 OR4C16Q8NGL9 310 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 OR9G1Q8NH87 305 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 ZNF596Q8TC21 504 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 UPRTQ96BW1 309 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 CLEC7AQ9BXN2 247 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 HRASLSQ9HDD0 168 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 OR1A1Q9P1Q5 309 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 SCP2D1Q9UJQ7 156 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 OR2W1Q9Y3N9 320 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 AUP1Q9Y679 476 aa10.38□□□□□ -0.75
SCLT1-202ENST00000439369 FLNBO75369 2602 aaKnown RBP10.37□□□□□ -0.75
SCLT1-202ENST00000439369 CD5LO43866 347 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 SLC22A5O76082 557 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 AMY2AP04746 511 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 ZNF735P0CB33 412 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 ZNF16P17020 682 aaPredicted RBP10.37□□□□□ -0.75
SCLT1-202ENST00000439369 NFYBP25208 207 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 FCGR2CP31995 323 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 PPP1CCP36873 323 aaKnown RBP10.37□□□□□ -0.75
SCLT1-202ENST00000439369 CEACAM6P40199 344 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 PRRX1P54821 245 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 TSPAN5P62079 268 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 MSMO1Q15800 293 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 MZT2BQ6NZ67 158 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 SLC25A48Q6ZT89 311 aaKnown RBP10.37□□□□□ -0.75
SCLT1-202ENST00000439369 VMO1Q7Z5L0 202 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 CCDC168Q8NDH2 2452 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 ZNF439Q8NDP4 499 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 BEND2Q8NDZ0 799 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 OR2AK2Q8NG84 335 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 OR52L2PQ8NGH6 319 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 UBALD1Q8TB05 177 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 TBX15Q96SF7 602 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 SLC6A7Q99884 636 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 SUCNR1Q9BXA5 334 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 TMPRSS13Q9BYE2 586 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 TINAGL1Q9GZM7 467 aaPredicted RBP10.37□□□□□ -0.75
SCLT1-202ENST00000439369 C7orf69Q9H7B7 122 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 RDH8Q9NYR8 311 aa10.37□□□□□ -0.75
SCLT1-202ENST00000439369 CREBBPQ92793 2442 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 IGHV2-26A0A0B4J1V2 119 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 SMAD7O15105 426 aaKnown RBP10.36□□□□□ -0.75
SCLT1-202ENST00000439369 PLA2G10O15496 165 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 LYRM1O43325 122 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 PPYP01298 95 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 UBE2E1P51965 193 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 UCP3P55916 312 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 BPIFB3P59826 476 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 HERV-K104P61576 105 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 IFITM3Q01628 133 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 GNMTQ14749 295 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 SURF2Q15527 256 aaPredicted RBP10.36□□□□□ -0.75
SCLT1-202ENST00000439369 LTC4SQ16873 150 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 LPCAT3Q6P1A2 487 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 ZNF782Q6ZMW2 699 aaPredicted RBP10.36□□□□□ -0.75
SCLT1-202ENST00000439369 LHFPL1Q86WI0 220 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 ABHD12Q8N2K0 398 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 OR4D10Q8NGI6 311 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 OR56B4Q8NH76 319 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 TERB2Q8NHR7 220 aa10.36□□□□□ -0.75
SCLT1-202ENST00000439369 ZFAND2BQ8WV99 257 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms