RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 PCDH15Q96QU1 1955 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 SPRY1O43609 319 aaPredicted RBP13.67□□□□□ -0.22
DHFR-201ENST00000439211 PLAC9Q5JTB6 97 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 CISD2Q8N5K1 135 aaKnown RBP13.67□□□□□ -0.22
DHFR-201ENST00000439211 SMRP1Q8NCR6 262 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 OR2AE1Q8NHA4 323 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 SPTSSAQ969W0 71 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 LOXL4Q96JB6 756 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 MOB1AQ9H8S9 216 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 TMEM242Q9NWH2 141 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 A0A1W2PR80 420 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 NDUFS8O00217 210 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 DBHP09172 617 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 UCP2P55851 309 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 ATOH7Q8N100 152 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 D2HGDHQ8N465 521 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 HDHD3Q9BSH5 251 aaPredicted RBP13.66□□□□□ -0.22
DHFR-201ENST00000439211 MEGF9Q9H1U4 602 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 CSRP1P21291 193 aaKnown RBP13.66□□□□□ -0.22
DHFR-201ENST00000439211 RRADP55042 308 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 ZNF154Q13106 437 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 TGIF2LYQ8IUE0 185 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 FBXL14Q8N1E6 418 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 OXGR1Q96P68 337 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 PTPRSQ13332 1948 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 MYO7BQ6PIF6 2116 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 SPEGQ15772 3267 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 LRRC3CA6NJW4 275 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 M0R135 149 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 ZNF737O75373 536 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 GRB2P62993 217 aaKnown RBP13.66□□□□□ -0.22
DHFR-201ENST00000439211 OCIAD2Q56VL3 154 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 CCDC71LQ8N9Z2 235 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 IFI44Q8TCB0 444 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 BORCS7Q96B45 105 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 ZNF799Q96GE5 643 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 CSTL1Q9H114 145 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 GTF3C1Q12789 2109 aa13.66□□□□□ -0.22
DHFR-201ENST00000439211 DUXBA0A1W2PPF3 345 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 WDR1O75083 606 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 MSR1P21757 451 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 LTBRP36941 435 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 PSMF1Q92530 271 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 HIPK2Q9H2X6 1198 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 SEPSECSQ9HD40 501 aaKnown RBP13.65□□□□□ -0.22
DHFR-201ENST00000439211 PTRH2Q9Y3E5 179 aaKnown RBP13.65□□□□□ -0.22
DHFR-201ENST00000439211 EFNA3P52797 238 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 NXPH1P58417 271 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 RPS18P62269 152 aaKnown RBP13.65□□□□□ -0.22
DHFR-201ENST00000439211 PAFAH1B2P68402 229 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 TRIM61Q5EBN2 209 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 CDCP2Q5VXM1 449 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 PARLQ9H300 379 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 GPR35Q9HC97 309 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 GDF9O60383 454 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 OR7C1O76099 320 aaPredicted RBP13.65□□□□□ -0.22
DHFR-201ENST00000439211 GCH1P30793 250 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 PRSS8Q16651 343 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 ABHD3Q8WU67 409 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 CST9LQ9H4G1 147 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 PLSCR2Q9NRY7 297 aa13.65□□□□□ -0.22
DHFR-201ENST00000439211 LMO1P25800 156 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 ECI1P42126 302 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 C1QL2Q7Z5L3 287 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 ZNF501Q96CX3 271 aaPredicted RBP13.64□□□□□ -0.23
DHFR-201ENST00000439211 NAA60Q9H7X0 242 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 ZNF319Q9P2F9 582 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 RAD51DO75771 328 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 PATE4P0C8F1 98 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 DUSP3P51452 185 aaPredicted RBP13.64□□□□□ -0.23
DHFR-201ENST00000439211 SLC38A9Q8NBW4 561 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 PIGCQ92535 297 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 CYYR1Q96J86 154 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 CALHM2Q9HA72 323 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 HSPB7Q9UBY9 170 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 TUBD1Q9UJT1 453 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 TMEM14DPA8MWL7 114 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 TMEM50BP56557 158 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 TPTE2P1Q5T6R2 138 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 C9orf135Q5VTT2 229 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 WDFY1Q8IWB7 410 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 TMEM252Q8N6L7 170 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 COX11Q9Y6N1 276 aa13.64□□□□□ -0.23
DHFR-201ENST00000439211 HSPB6O14558 160 aa13.63□□□□□ -0.23
DHFR-201ENST00000439211 IGHV3-9P01782 118 aa13.63□□□□□ -0.23
DHFR-201ENST00000439211 CTSDP07339 412 aaPredicted RBP13.63□□□□□ -0.23
DHFR-201ENST00000439211 SUMO3P55854 103 aaPredicted RBP13.63□□□□□ -0.23
DHFR-201ENST00000439211 OR51G1Q8NGK1 321 aa13.63□□□□□ -0.23
DHFR-201ENST00000439211 WNT10AQ9GZT5 417 aa13.63□□□□□ -0.23
DHFR-201ENST00000439211 MUC22E2RYF6 1773 aaPredicted RBP13.63□□□□□ -0.23
DHFR-201ENST00000439211 CDS2O95674 445 aa13.63□□□□□ -0.23
DHFR-201ENST00000439211 ZP4Q12836 540 aa13.63□□□□□ -0.23
DHFR-201ENST00000439211 H1FOOQ8IZA3 346 aaPredicted RBP13.63□□□□□ -0.23
DHFR-201ENST00000439211 RSG1Q9BU20 258 aa13.63□□□□□ -0.23
DHFR-201ENST00000439211 MDFIC2A0A1B0GVS7 189 aa13.63□□□□□ -0.23
DHFR-201ENST00000439211 FAM166BA8MTA8 275 aa13.63□□□□□ -0.23
DHFR-201ENST00000439211 GZMHP20718 246 aa13.63□□□□□ -0.23
DHFR-201ENST00000439211 CFHR1Q03591 330 aa13.63□□□□□ -0.23
DHFR-201ENST00000439211 ZNF90Q03938 601 aa13.63□□□□□ -0.23
DHFR-201ENST00000439211 FAM90A2PQ658T7 463 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms