RNA–Protein interactions for RNA: ENST00000437607.1

PTPRF-208, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 788 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-208ENST00000437607 TMEM229BQ8NBD8 167 aa9.97□□□□□ -0.81
PTPRF-208ENST00000437607 OR5H2Q8NGV7 314 aa9.97□□□□□ -0.81
PTPRF-208ENST00000437607 DEDD2Q8WXF8 326 aa9.97□□□□□ -0.81
PTPRF-208ENST00000437607 SNAPC3Q92966 411 aa9.97□□□□□ -0.81
PTPRF-208ENST00000437607 C7orf50Q9BRJ6 194 aaKnown RBP9.97□□□□□ -0.81
PTPRF-208ENST00000437607 Q9N2K0 584 aa9.97□□□□□ -0.81
PTPRF-208ENST00000437607 RAB9BQ9NP90 201 aa9.97□□□□□ -0.81
PTPRF-208ENST00000437607 KCNIP1Q9NZI2 227 aa9.97□□□□□ -0.81
PTPRF-208ENST00000437607 OR6C3Q9NZP0 311 aa9.97□□□□□ -0.81
PTPRF-208ENST00000437607 CLN8Q9UBY8 286 aa9.97□□□□□ -0.81
PTPRF-208ENST00000437607 TRGV10A0A0A0MS01 117 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 TRBV23-1A0A0A0MS06 115 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 RAB3DO95716 219 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 MT-ND4P03905 459 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 OMGP23515 440 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 HLA-DMAP28067 261 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 HRH1P35367 487 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 OR3A3P47888 321 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 GLIPR1P48060 266 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 NPY4RP50391 375 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 GNB2P62879 340 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 SRSF4Q08170 494 aaKnown RBP9.96□□□□□ -0.82
PTPRF-208ENST00000437607 ASAH1Q13510 395 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 DYRK1AQ13627 763 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 MEF2DQ14814 521 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 ESCO2Q56NI9 601 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 OR52W1Q6IF63 320 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 STEAP1BQ6NZ63 245 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 MZT2BQ6NZ67 158 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 FAM185AQ8N0U4 392 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 GAPTQ8N292 157 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 POC5Q8NA72 575 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 MRGPRDQ8TDS7 321 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 CCDC107Q8WV48 283 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 UPRTQ96BW1 309 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 MS4A7Q9GZW8 240 aaPredicted RBP9.96□□□□□ -0.82
PTPRF-208ENST00000437607 MCUBQ9NWR8 336 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 ANXA10Q9UJ72 324 aa9.96□□□□□ -0.82
PTPRF-208ENST00000437607 hADV38S2A0JD32 116 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 NAP1L6A6NFF2 107 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 M0QYG6 137 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 TNFRSF13BO14836 293 aaPredicted RBP9.95□□□□□ -0.82
PTPRF-208ENST00000437607 GPR37O15354 613 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 FABP7O15540 132 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 LYRM1O43325 122 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 CD3DP04234 171 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 IFNA6P05013 189 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 PPIAL4GP0DN37 164 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 NAT1P18440 290 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 RPL31P62899 125 aaKnown RBP9.95□□□□□ -0.82
PTPRF-208ENST00000437607 CDK10Q15131 360 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 SRSF7Q16629 238 aaKnown RBP eCLIP9.95□□□□□ -0.825e-7■■■□□ 16.8
PTPRF-208ENST00000437607 ZNF880Q6PDB4 577 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 Q6ZS49 121 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 ZNF554Q86TJ5 538 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 PRR18Q8N4B5 295 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 OR4C16Q8NGL9 310 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 SSBP3Q9BWW4 388 aaPredicted RBP9.95□□□□□ -0.82
PTPRF-208ENST00000437607 NCOR1P1Q9H4R4 102 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 MBNL3Q9NUK0 354 aaKnown RBP9.95□□□□□ -0.82
PTPRF-208ENST00000437607 NECAP2Q9NVZ3 263 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 EHFQ9NZC4 300 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 TBC1D24Q9ULP9 559 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 LINC00312Q9Y6C7 94 aa9.95□□□□□ -0.82
PTPRF-208ENST00000437607 TRAV39A0A0B4J263 110 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 TRAV40A0A0B4J280 105 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 IGHV2-70DA0A0C4DH43 119 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 TRDCB7Z8K6 153 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 DISC1C4P0D8 188 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 SPINT2O43291 252 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 PMP2P02689 132 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 CD74P04233 296 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 AMY2AP04746 511 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 RCC1P18754 421 aaPredicted RBP9.94□□□□□ -0.82
PTPRF-208ENST00000437607 IFITM3Q01628 133 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 MEF2CQ06413 473 aaPredicted RBP9.94□□□□□ -0.82
PTPRF-208ENST00000437607 HMGN3Q15651 99 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 RGS21Q2M5E4 152 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 MIDNQ504T8 468 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 WDR25Q64LD2 544 aaPredicted RBP9.94□□□□□ -0.82
PTPRF-208ENST00000437607 FAAP20Q6NZ36 180 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 Q6ZPA2 131 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 TMEM17Q86X19 198 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 FGFRL1Q8N441 504 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 OR5AP2Q8NGF4 316 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 OR4A4PQ8NGN8 299 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 OR13A1Q8NGR1 328 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 ENKURQ8TC29 256 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 CABLES2Q9BTV7 478 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 GAL3ST2Q9H3Q3 398 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 PRDM13Q9H4Q3 707 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 TAF9BQ9HBM6 251 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 MMP24Q9Y5R2 645 aa9.94□□□□□ -0.82
PTPRF-208ENST00000437607 IGKV1D-8A0A087WSZ0 117 aa9.93□□□□□ -0.82
PTPRF-208ENST00000437607 A0A1W2PPH5 198 aa9.93□□□□□ -0.82
PTPRF-208ENST00000437607 ZNF729A6NN14 1252 aaPredicted RBP9.93□□□□□ -0.82
PTPRF-208ENST00000437607 C12orf77C9JDV5 145 aa9.93□□□□□ -0.82
PTPRF-208ENST00000437607 HOXA3O43365 443 aaPredicted RBP9.93□□□□□ -0.82
PTPRF-208ENST00000437607 PTTG1O95997 202 aa9.93□□□□□ -0.82
PTPRF-208ENST00000437607 CTXN2P0C2S0 81 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms