RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 CPB2Q96IY4 423 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 ACBD6Q9BR61 282 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 ANAPC13Q9BS18 74 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 THTPAQ9BU02 230 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 UPF3BQ9BZI7 483 aaKnown RBP3.47□□□□□ -1.85
USP54-206ENST00000433394 DSN1Q9H410 356 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 PARVBQ9HBI1 364 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 PAQR5Q9NXK6 330 aaPredicted RBP3.47□□□□□ -1.85
USP54-206ENST00000433394 MRM2Q9UI43 246 aaKnown RBP3.47□□□□□ -1.85
USP54-206ENST00000433394 A0A1W2PRG6 482 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 I3L4J1 428 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 LGALS9O00182 355 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 RPP14O95059 124 aaKnown RBP3.46□□□□□ -1.86
USP54-206ENST00000433394 DEXIO95424 95 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 AHSA1O95433 338 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 IFNA14P01570 189 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 IGHV1-46P01743 117 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 IL6P05231 212 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 S100A1P23297 94 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 ELK4P28324 431 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 SLC6A1P30531 599 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 ALDH3A1P30838 453 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 CRATP43155 626 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 CEBPGP53567 150 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 BIKQ13323 160 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 LY6EQ16553 131 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 KHDRBS2Q5VWX1 349 aaKnown RBP3.46□□□□□ -1.86
USP54-206ENST00000433394 FAM104BQ5XKR9 115 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 CLEC6AQ6EIG7 209 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 SSX7Q7RTT5 188 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 DCXRQ7Z4W1 244 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 LINC00596Q86U02 117 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 C10orf107Q8IVU9 208 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 CCDC112Q8NEF3 446 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 SLC35B4Q969S0 331 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 ZNF75AQ96N20 296 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 SERPINB11Q96P15 392 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 MED10Q9BTT4 135 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 OR51V1Q9H2C8 321 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 IFT46Q9NQC8 304 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 PSMD13Q9UNM6 376 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 TIMM22Q9Y584 194 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 MYH4Q9Y623 1939 aa3.46□□□□□ -1.86
USP54-206ENST00000433394 A0A1B0GTI1 187 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 GMNCA6NCL1 334 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 RBFOX3A6NFN3 312 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 DENRO43583 198 aaKnown RBP3.45□□□□□ -1.86
USP54-206ENST00000433394 IGKV1D-16P01601 117 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 SEC11BP0C7V7 166 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 IMPA1P29218 277 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 DYNLL1P63167 89 aaKnown RBP3.45□□□□□ -1.86
USP54-206ENST00000433394 MRPS25P82663 173 aaKnown RBP3.45□□□□□ -1.86
USP54-206ENST00000433394 CEACAM16Q2WEN9 425 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 CCDC153Q494R4 210 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 CLLU1OSQ5K130 101 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 MRPL2Q5T653 305 aaKnown RBP3.45□□□□□ -1.86
USP54-206ENST00000433394 IGFL1Q6UW32 110 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 USP50Q70EL3 339 aaPredicted RBP3.45□□□□□ -1.86
USP54-206ENST00000433394 DAZ4Q86SG3 579 aaKnown RBP3.45□□□□□ -1.86
USP54-206ENST00000433394 C10orf67Q8IYJ2 551 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 ZNF561Q8N587 486 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 KLF14Q8TD94 323 aaPredicted RBP3.45□□□□□ -1.86
USP54-206ENST00000433394 TWIST2Q8WVJ9 160 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 PPP1R36Q96LQ0 422 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 CGREF1Q99674 301 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 MS4A8Q9BY19 250 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 RDH14Q9HBH5 336 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 DAZ1Q9NQZ3 744 aaKnown RBP3.45□□□□□ -1.86
USP54-206ENST00000433394 CA10Q9NS85 328 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 NRBP2Q9NSY0 501 aa3.45□□□□□ -1.86
USP54-206ENST00000433394 KLF13Q9Y2Y9 288 aaPredicted RBP3.45□□□□□ -1.86
USP54-206ENST00000433394 A0A0A6YYH2 397 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 A6NJ64 397 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 SMIM23A6NLE4 172 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 TNFAIP8O95379 198 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 IGKV1-39P01597 117 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 IGKV1D-39P04432 117 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 HMGN1P05114 100 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 CECR9P0C854 216 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 SYT1P21579 422 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 UGT2B10P36537 528 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 MAGEA3P43357 314 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 GCLMP48507 274 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 TGM4P49221 684 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 GLO1Q04760 184 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 ZNF678Q5SXM1 525 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 TTC33Q6PID6 262 aaPredicted RBP3.44□□□□□ -1.86
USP54-206ENST00000433394 FAM19A1Q7Z5A9 133 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 SGPP2Q8IWX5 399 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 TBC1D19Q8N5T2 526 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 OR2Y1Q8NGV0 311 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 GTF2H4Q92759 462 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 SLC25A31Q9H0C2 315 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 LHX5Q9H2C1 402 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 TRIM45Q9H8W5 580 aaPredicted RBP3.44□□□□□ -1.86
USP54-206ENST00000433394 CYB5R1Q9UHQ9 305 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 C14orf166Q9Y224 244 aaKnown RBP3.44□□□□□ -1.86
USP54-206ENST00000433394 SAMHD1Q9Y3Z3 626 aaKnown RBP3.44□□□□□ -1.86
USP54-206ENST00000433394 FADS3Q9Y5Q0 445 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 V9GYQ6 96 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms