RNA–Protein interactions for RNA: ENST00000430104.5

SHH-202, Transcript of sonic hedgehog, humanhuman

TSL 1 (best)

Gene SHH, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHH-202ENST00000430104 A6NDX4 124 aa15.01□□□□□ -0.01
SHH-202ENST00000430104 CHST1O43916 411 aa15.01□□□□□ -0.01
SHH-202ENST00000430104 NDUFA7O95182 113 aa15.01□□□□□ -0.01
SHH-202ENST00000430104 CD3GP09693 182 aa15.01□□□□□ -0.01
SHH-202ENST00000430104 MNDAP41218 407 aa15.01□□□□□ -0.01
SHH-202ENST00000430104 MRPS15P82914 257 aaKnown RBP15.01□□□□□ -0.01
SHH-202ENST00000430104 MADCAM1Q13477 382 aa15.01□□□□□ -0.01
SHH-202ENST00000430104 GNMTQ14749 295 aa15.01□□□□□ -0.01
SHH-202ENST00000430104 HMGN3Q15651 99 aa15.01□□□□□ -0.01
SHH-202ENST00000430104 PTX4Q96A99 478 aa15.01□□□□□ -0.01
SHH-202ENST00000430104 GALMQ96C23 342 aa15.01□□□□□ -0.01
SHH-202ENST00000430104 HAX1O00165 279 aa15□□□□□ -0.01
SHH-202ENST00000430104 RAB27BO00194 218 aa15□□□□□ -0.01
SHH-202ENST00000430104 PPP1CCP36873 323 aaKnown RBP15□□□□□ -0.01
SHH-202ENST00000430104 DYNLT3P51808 116 aa15□□□□□ -0.01
SHH-202ENST00000430104 TMEM30BQ3MIR4 351 aa15□□□□□ -0.01
SHH-202ENST00000430104 MORN2Q502X0 79 aa15□□□□□ -0.01
SHH-202ENST00000430104 CCDC144NLQ6NUI1 221 aa15□□□□□ -0.01
SHH-202ENST00000430104 ZNF880Q6PDB4 577 aa15□□□□□ -0.01
SHH-202ENST00000430104 ZNF554Q86TJ5 538 aa15□□□□□ -0.01
SHH-202ENST00000430104 OR13F1Q8NGS4 319 aa15□□□□□ -0.01
SHH-202ENST00000430104 OR5H6Q8NGV6 325 aa15□□□□□ -0.01
SHH-202ENST00000430104 CAPSLQ8WWF8 208 aa15□□□□□ -0.01
SHH-202ENST00000430104 MRPS26Q9BYN8 205 aaKnown RBP15□□□□□ -0.01
SHH-202ENST00000430104 RAB18Q9NP72 206 aa15□□□□□ -0.01
SHH-202ENST00000430104 C12orf4Q9NQ89 552 aa15□□□□□ -0.01
SHH-202ENST00000430104 PITPNC1Q9UKF7 332 aa15□□□□□ -0.01
SHH-202ENST00000430104 KCNK7Q9Y2U2 307 aa15□□□□□ -0.01
SHH-202ENST00000430104 OOSP1A8MZH6 123 aa14.99□□□□□ -0.01
SHH-202ENST00000430104 RPS19P39019 145 aaKnown RBP14.99□□□□□ -0.01
SHH-202ENST00000430104 REG1BP48304 166 aa14.99□□□□□ -0.01
SHH-202ENST00000430104 ZNF134P52741 427 aa14.99□□□□□ -0.01
SHH-202ENST00000430104 ARFRP1Q13795 201 aa14.99□□□□□ -0.01
SHH-202ENST00000430104 CT45A1Q5HYN5 189 aa14.99□□□□□ -0.01
SHH-202ENST00000430104 LIAT1Q6ZQX7 453 aa14.99□□□□□ -0.01
SHH-202ENST00000430104 MOB1BQ7L9L4 216 aa14.99□□□□□ -0.01
SHH-202ENST00000430104 LINC00311Q8N616 119 aa14.99□□□□□ -0.01
SHH-202ENST00000430104 ZNF439Q8NDP4 499 aa14.99□□□□□ -0.01
SHH-202ENST00000430104 CT45A3Q8NHU0 189 aa14.99□□□□□ -0.01
SHH-202ENST00000430104 LINC01006Q8NI28 216 aa14.99□□□□□ -0.01
SHH-202ENST00000430104 OCSTAMPQ9BR26 566 aa14.99□□□□□ -0.01
SHH-202ENST00000430104 Q9N2K0 584 aa14.99□□□□□ -0.01
SHH-202ENST00000430104 JPT1Q9UK76 154 aa14.99□□□□□ -0.01
SHH-202ENST00000430104 TRBV6-6A0A0A6YYG2 114 aa14.98□□□□□ -0.01
SHH-202ENST00000430104 CLPSL1A2RUU4 121 aa14.98□□□□□ -0.01
SHH-202ENST00000430104 HSD17B6O14756 317 aa14.98□□□□□ -0.01
SHH-202ENST00000430104 HIST1H1DP16402 221 aaKnown RBP14.98□□□□□ -0.01
SHH-202ENST00000430104 IL3RAP26951 378 aa14.98□□□□□ -0.01
SHH-202ENST00000430104 SERPINB10P48595 397 aa14.98□□□□□ -0.01
SHH-202ENST00000430104 VBP1P61758 197 aa14.98□□□□□ -0.01
SHH-202ENST00000430104 NCS1P62166 190 aa14.98□□□□□ -0.01
SHH-202ENST00000430104 HLA-DRB3P79483 266 aa14.98□□□□□ -0.01
SHH-202ENST00000430104 HTD2P86397 168 aa14.98□□□□□ -0.01
SHH-202ENST00000430104 MOB3BQ86TA1 216 aa14.98□□□□□ -0.01
SHH-202ENST00000430104 DRAM1Q8N682 238 aa14.98□□□□□ -0.01
SHH-202ENST00000430104 C8orf31Q8N9H6 132 aa14.98□□□□□ -0.01
SHH-202ENST00000430104 SIGLEC9Q9Y336 463 aa14.98□□□□□ -0.01
SHH-202ENST00000430104 RNF114Q9Y508 228 aa14.98□□□□□ -0.01
SHH-202ENST00000430104 A0A1B0GUS0 222 aa14.97□□□□□ -0.01
SHH-202ENST00000430104 A0A1W2PPI3 338 aa14.97□□□□□ -0.01
SHH-202ENST00000430104 POM121CA8CG34 1229 aa14.97□□□□□ -0.01
SHH-202ENST00000430104 MFNGO00587 321 aa14.97□□□□□ -0.01
SHH-202ENST00000430104 TIMM23O14925 209 aa14.97□□□□□ -0.01
SHH-202ENST00000430104 GAPDHP04406 335 aaKnown RBP14.97□□□□□ -0.01
SHH-202ENST00000430104 SCTP09683 121 aa14.97□□□□□ -0.01
SHH-202ENST00000430104 RAB7AP51149 207 aa14.97□□□□□ -0.01
SHH-202ENST00000430104 Q3ZCU0 254 aa14.97□□□□□ -0.01
SHH-202ENST00000430104 CDNFQ49AH0 187 aa14.97□□□□□ -0.01
SHH-202ENST00000430104 FBLN7Q53RD9 439 aa14.97□□□□□ -0.01
SHH-202ENST00000430104 SLC25A48Q6ZT89 311 aaKnown RBP14.97□□□□□ -0.01
SHH-202ENST00000430104 LYG1Q8N1E2 194 aa14.97□□□□□ -0.01
SHH-202ENST00000430104 OR4C13Q8NGP0 309 aa14.97□□□□□ -0.01
SHH-202ENST00000430104 OR56B4Q8NH76 319 aa14.97□□□□□ -0.01
SHH-202ENST00000430104 MAFIPQ8WZ33 124 aa14.97□□□□□ -0.01
SHH-202ENST00000430104 NPFFR1Q9GZQ6 430 aa14.97□□□□□ -0.01
SHH-202ENST00000430104 NAA50Q9GZZ1 169 aaKnown RBP14.97□□□□□ -0.01
SHH-202ENST00000430104 RHBDL2Q9NX52 303 aa14.97□□□□□ -0.01
SHH-202ENST00000430104 ELF5Q9UKW6 265 aaPredicted RBP14.97□□□□□ -0.01
SHH-202ENST00000430104 MGAT4AQ9UM21 535 aa14.97□□□□□ -0.01
SHH-202ENST00000430104 MMP24Q9Y5R2 645 aa14.97□□□□□ -0.01
SHH-202ENST00000430104 YPEL1O60688 119 aa14.96□□□□□ -0.01
SHH-202ENST00000430104 TSPAN9O75954 239 aa14.96□□□□□ -0.01
SHH-202ENST00000430104 RGS11O94810 467 aa14.96□□□□□ -0.01
SHH-202ENST00000430104 SNRNP70P08621 437 aaKnown RBP14.96□□□□□ -0.01
SHH-202ENST00000430104 TALDO1P37837 337 aa14.96□□□□□ -0.01
SHH-202ENST00000430104 HES1Q14469 280 aa14.96□□□□□ -0.01
SHH-202ENST00000430104 GPR107Q5VW38 600 aa14.96□□□□□ -0.01
SHH-202ENST00000430104 IZUMO1Q8IYV9 350 aa14.96□□□□□ -0.01
SHH-202ENST00000430104 PHF21AQ96BD5 680 aa14.96□□□□□ -0.01
SHH-202ENST00000430104 YPEL2Q96QA6 119 aa14.96□□□□□ -0.01
SHH-202ENST00000430104 ABHD14AQ9BUJ0 271 aa14.96□□□□□ -0.01
SHH-202ENST00000430104 ZNF747Q9BV97 191 aa14.96□□□□□ -0.01
SHH-202ENST00000430104 C16orf95Q9H693 158 aa14.96□□□□□ -0.01
SHH-202ENST00000430104 SLC23A1Q9UHI7 598 aa14.96□□□□□ -0.01
SHH-202ENST00000430104 ZNF230Q9UIE0 474 aaPredicted RBP14.96□□□□□ -0.01
SHH-202ENST00000430104 ETV7Q9Y603 341 aa14.96□□□□□ -0.01
SHH-202ENST00000430104 STAB1Q9NY15 2570 aa14.96□□□□□ -0.01
SHH-202ENST00000430104 IGHV3-72A0A0B4J1Y9 119 aa14.95□□□□□ -0.02
SHH-202ENST00000430104 IGHV1-3A0A0C4DH29 117 aa14.95□□□□□ -0.02
SHH-202ENST00000430104 TRDCB7Z8K6 153 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms