RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 CISD2Q8N5K1 135 aaKnown RBP11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 OR2C3Q8N628 320 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 RNASE11Q8TAA1 199 aaKnown RBP11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 MRGPRDQ8TDS7 321 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 GALMQ96C23 342 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 SAT2Q96F10 170 aaPredicted RBP11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 SMIM8Q96KF7 97 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 MMP26Q9NRE1 261 aa11.76□□□□□ -0.53
APOBEC3D-202ENST00000427494 PIGBOS1A0A0B4J2F0 54 aa11.75□□□□□ -0.53
APOBEC3D-202ENST00000427494 FAM24AA6NFZ4 105 aa11.75□□□□□ -0.53
APOBEC3D-202ENST00000427494 A8MXE2 369 aa11.75□□□□□ -0.53
APOBEC3D-202ENST00000427494 ATP6V1G2-DDX39BF2Z307 99 aa11.75□□□□□ -0.53
APOBEC3D-202ENST00000427494 PRRG2O14669 202 aa11.75□□□□□ -0.53
APOBEC3D-202ENST00000427494 HBZP02008 142 aa11.75□□□□□ -0.53
APOBEC3D-202ENST00000427494 GLRXP35754 106 aa11.75□□□□□ -0.53
APOBEC3D-202ENST00000427494 CAV2P51636 162 aa11.75□□□□□ -0.53
APOBEC3D-202ENST00000427494 NKX6-1P78426 367 aaPredicted RBP11.75□□□□□ -0.53
APOBEC3D-202ENST00000427494 KRBOX4Q5JUW0 171 aa11.75□□□□□ -0.53
APOBEC3D-202ENST00000427494 FAM209AQ5JX71 171 aa11.75□□□□□ -0.53
APOBEC3D-202ENST00000427494 PXDC1Q5TGL8 231 aa11.75□□□□□ -0.53
APOBEC3D-202ENST00000427494 MS4A7Q9GZW8 240 aaPredicted RBP11.75□□□□□ -0.53
APOBEC3D-202ENST00000427494 KIAA2026Q5HYC2 2103 aa11.75□□□□□ -0.53
APOBEC3D-202ENST00000427494 DSPP15924 2871 aaKnown RBP11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 A0A0G2JRQ6 117 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 NUDT19A8MXV4 375 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 SIGLEC5O15389 551 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 APOC3P02656 99 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 M6PRP20645 277 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 LPAR6P43657 344 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 GLIPR1P48060 266 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 TBR1Q16650 682 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 DOLPP1Q86YN1 238 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 DRAM1Q8N682 238 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 CD177Q8N6Q3 437 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 TPRX1Q8N7U7 411 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 Q8NA96 180 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 OR52L2PQ8NGH6 319 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 GPR146Q96CH1 333 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 OR2V2Q96R30 315 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 ARV1Q9H2C2 271 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 HRH4Q9H3N8 390 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 LIN7CQ9NUP9 197 aaKnown RBP11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 PLA2G2EQ9NZK7 142 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 IGSF23A1L1A6 192 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 WRBO00258 174 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 SPRY3O43610 288 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 IGKV1-39P01597 117 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 IGKV1D-39P04432 117 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 PRDX2P32119 198 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 ASCL1P50553 236 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 AKR1C2P52895 323 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 ID3Q02535 119 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 AKR1C1Q04828 323 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 IL34Q6ZMJ4 242 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 OR10Z1Q8NGY1 313 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 TMEM171Q8WVE6 324 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 MEGF10Q96KG7 1140 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 GINS3Q9BRX5 216 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 ESRP2Q9H6T0 727 aaKnown RBP11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 PLEKHF2Q9H8W4 249 aa11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 LYRM2Q9NU23 88 aaPredicted RBP11.74□□□□□ -0.53
APOBEC3D-202ENST00000427494 A0A0G2JNJ9 132 aa11.73□□□□□ -0.53
APOBEC3D-202ENST00000427494 A0A1B0GU03 582 aa11.73□□□□□ -0.53
APOBEC3D-202ENST00000427494 SRRM5B3KS81 715 aa11.73□□□□□ -0.53
APOBEC3D-202ENST00000427494 RPS23P62266 143 aaKnown RBP11.73□□□□□ -0.53
APOBEC3D-202ENST00000427494 BLOC1S1P78537 153 aa11.73□□□□□ -0.53
APOBEC3D-202ENST00000427494 SPRNQ5BIV9 151 aa11.73□□□□□ -0.53
APOBEC3D-202ENST00000427494 FAM53AQ6NSI3 398 aaPredicted RBP11.73□□□□□ -0.53
APOBEC3D-202ENST00000427494 GFRALQ6UXV0 394 aa11.73□□□□□ -0.53
APOBEC3D-202ENST00000427494 MOGAT3Q86VF5 341 aa11.73□□□□□ -0.53
APOBEC3D-202ENST00000427494 ZNF645Q8N7E2 425 aa11.73□□□□□ -0.53
APOBEC3D-202ENST00000427494 OR13A1Q8NGR1 328 aa11.73□□□□□ -0.53
APOBEC3D-202ENST00000427494 NINJ1Q92982 152 aa11.73□□□□□ -0.53
APOBEC3D-202ENST00000427494 SLC25A31Q9H0C2 315 aa11.73□□□□□ -0.53
APOBEC3D-202ENST00000427494 OR2D2Q9H210 308 aa11.73□□□□□ -0.53
APOBEC3D-202ENST00000427494 Q9UFV3 132 aa11.73□□□□□ -0.53
APOBEC3D-202ENST00000427494 IGLV3-9A0A075B6K5 115 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 IGHV3OR15-7A0A075B7D8 119 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 RNF212BA8MTL3 300 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 B8ZZF3 427 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 SLC25A6P12236 298 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 MMP9P14780 707 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 OMGP23515 440 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 CCKARP32238 428 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 SSTR5P35346 364 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 PJVKQ0ZLH3 352 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 EDDM3AQ14507 147 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 SWI5Q1ZZU3 235 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 C22orf34Q6ZV56 151 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 LSM10Q969L4 123 aaKnown RBP11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 SH3BGRL2Q9UJC5 107 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 RNF150Q9ULK6 438 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 MGAQ8IWI9 3026 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 BOD1L1Q8NFC6 3051 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 CHST1O43916 411 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 PITX3O75364 302 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 SEC11BP0C7V7 166 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 CD40P25942 277 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 PPP1CCP36873 323 aaKnown RBP11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 SRSF3P84103 164 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms