RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 FAM57BQ71RH2 274 aa13.81□□□□□ -0.2
PKP4-205ENST00000426248 ABHD16AO95870 558 aa13.8□□□□□ -0.2
PKP4-205ENST00000426248 GNRHRP30968 328 aa13.8□□□□□ -0.2
PKP4-205ENST00000426248 DNLZQ5SXM8 178 aa13.8□□□□□ -0.2
PKP4-205ENST00000426248 SLC35E3Q7Z769 313 aa13.8□□□□□ -0.2
PKP4-205ENST00000426248 MYPOPQ86VE0 399 aaPredicted RBP13.8□□□□□ -0.2
PKP4-205ENST00000426248 DEPPQ9NTK1 212 aa13.8□□□□□ -0.2
PKP4-205ENST00000426248 PLEKHJ1Q9NW61 149 aa13.8□□□□□ -0.2
PKP4-205ENST00000426248 UBE2J1Q9Y385 318 aaPredicted RBP13.8□□□□□ -0.2
PKP4-205ENST00000426248 A0A1W2PR80 420 aa13.8□□□□□ -0.2
PKP4-205ENST00000426248 B4GALT1P15291 398 aa13.8□□□□□ -0.2
PKP4-205ENST00000426248 PTGER4P35408 488 aa13.8□□□□□ -0.2
PKP4-205ENST00000426248 SLC25A1P53007 311 aa13.8□□□□□ -0.2
PKP4-205ENST00000426248 SUPT4H1P63272 117 aaKnown RBP13.8□□□□□ -0.2
PKP4-205ENST00000426248 C16orf82Q7Z2V1 217 aa13.8□□□□□ -0.2
PKP4-205ENST00000426248 MS4A18H0YCH9 400 aa13.8□□□□□ -0.2
PKP4-205ENST00000426248 RAC3P60763 192 aa13.8□□□□□ -0.2
PKP4-205ENST00000426248 MS4A18Q3C1V0 323 aa13.8□□□□□ -0.2
PKP4-205ENST00000426248 TRIB1Q96RU8 372 aa13.8□□□□□ -0.2
PKP4-205ENST00000426248 A0A087WWC5 75 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 CLEC2AQ6UVW9 174 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 PARD6GQ9BYG4 376 aaPredicted RBP13.79□□□□□ -0.2
PKP4-205ENST00000426248 PATE4P0C8F1 98 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 HIST1H1DP16402 221 aaKnown RBP13.79□□□□□ -0.2
PKP4-205ENST00000426248 CEACAM8P31997 349 aaPredicted RBP13.79□□□□□ -0.2
PKP4-205ENST00000426248 HNRNPA3P51991 378 aaKnown RBP13.79□□□□□ -0.2
PKP4-205ENST00000426248 AARDQ4LEZ3 155 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 PIP4P1Q86T03 277 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 RTN4IP1Q8WWV3 396 aaPredicted RBP13.79□□□□□ -0.2
PKP4-205ENST00000426248 SLAMF6Q96DU3 332 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 RTBDNQ9BSG5 229 aaPredicted RBP13.79□□□□□ -0.2
PKP4-205ENST00000426248 MUC3AQ02505 3323 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 MSTNO14793 375 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 DHHO43323 396 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 EFNA2O43921 213 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 DBHP09172 617 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 Q5PR19 223 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 NOXO1Q8NFA2 376 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 KCNG3Q8TAE7 436 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 ASB10Q8WXI3 467 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 ZNF552Q9H707 407 aaPredicted RBP13.79□□□□□ -0.2
PKP4-205ENST00000426248 AURKAIP1Q9NWT8 199 aaPredicted RBP13.79□□□□□ -0.2
PKP4-205ENST00000426248 RER1O15258 196 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 ZIC3O60481 467 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 CHRM2P08172 466 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 CHRNA7P36544 502 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 CEACAM16Q2WEN9 425 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 Q6ZN92 141 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 BAGE3Q86Y29 109 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 BAGE2Q86Y30 109 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 APH1AQ96BI3 265 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 OR51I2Q9H344 312 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 ZNF665Q9H7R5 613 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 VAX2Q9UIW0 290 aa13.79□□□□□ -0.2
PKP4-205ENST00000426248 CD55P08174 381 aa13.78□□□□□ -0.2
PKP4-205ENST00000426248 OR5G3P0C626 314 aa13.78□□□□□ -0.2
PKP4-205ENST00000426248 DUSP1P28562 367 aa13.78□□□□□ -0.2
PKP4-205ENST00000426248 EWSR1Q01844 656 aaKnown RBP eCLIP13.78□□□□□ -0.23e-7■■□□□ 13
PKP4-205ENST00000426248 UNC119Q13432 240 aa13.78□□□□□ -0.2
PKP4-205ENST00000426248 ZNF728P0DKX0 622 aa13.78□□□□□ -0.2
PKP4-205ENST00000426248 NBL1P41271 181 aa13.78□□□□□ -0.2
PKP4-205ENST00000426248 HERV-K104P61576 105 aa13.78□□□□□ -0.2
PKP4-205ENST00000426248 RTP5Q14D33 572 aa13.78□□□□□ -0.2
PKP4-205ENST00000426248 ALKBH7Q9BT30 221 aaPredicted RBP13.78□□□□□ -0.2
PKP4-205ENST00000426248 OR10A2Q9H208 303 aa13.78□□□□□ -0.2
PKP4-205ENST00000426248 POLR3KQ9Y2Y1 108 aaPredicted RBP13.78□□□□□ -0.2
PKP4-205ENST00000426248 PHF3Q92576 2039 aaKnown RBP13.78□□□□□ -0.2
PKP4-205ENST00000426248 HINT1P49773 126 aaPredicted RBP13.78□□□□□ -0.2
PKP4-205ENST00000426248 MMDQ15546 238 aa13.78□□□□□ -0.2
PKP4-205ENST00000426248 GAL3ST2Q9H3Q3 398 aa13.78□□□□□ -0.2
PKP4-205ENST00000426248 TRAPPC1Q9Y5R8 145 aa13.78□□□□□ -0.2
PKP4-205ENST00000426248 PINLYPA6NC86 204 aa13.77□□□□□ -0.2
PKP4-205ENST00000426248 B4DEV8 164 aa13.77□□□□□ -0.2
PKP4-205ENST00000426248 IFNA1P01562 189 aa13.77□□□□□ -0.2
PKP4-205ENST00000426248 NKX2-1P43699 371 aaPredicted RBP13.77□□□□□ -0.2
PKP4-205ENST00000426248 OR3A4PP47883 348 aa13.77□□□□□ -0.2
PKP4-205ENST00000426248 C1orf194Q5T5A4 169 aa13.77□□□□□ -0.2
PKP4-205ENST00000426248 OR2C3Q8N628 320 aa13.77□□□□□ -0.2
PKP4-205ENST00000426248 OR52N5Q8NH56 324 aa13.77□□□□□ -0.2
PKP4-205ENST00000426248 AQP7P3A6NL99 342 aa13.77□□□□□ -0.21
PKP4-205ENST00000426248 MSR1P21757 451 aa13.77□□□□□ -0.21
PKP4-205ENST00000426248 MFAP5Q13361 173 aa13.77□□□□□ -0.21
PKP4-205ENST00000426248 ICAM4Q14773 271 aa13.77□□□□□ -0.21
PKP4-205ENST00000426248 ZNF684Q5T5D7 378 aa13.77□□□□□ -0.21
PKP4-205ENST00000426248 ZNF695Q8IW36 515 aa13.77□□□□□ -0.21
PKP4-205ENST00000426248 OR52M1Q8NGK5 317 aa13.77□□□□□ -0.21
PKP4-205ENST00000426248 OR51E1Q8TCB6 317 aa13.77□□□□□ -0.21
PKP4-205ENST00000426248 PSMF1Q92530 271 aa13.77□□□□□ -0.21
PKP4-205ENST00000426248 ZNF442Q9H7R0 627 aa13.77□□□□□ -0.21
PKP4-205ENST00000426248 MRPS18CQ9Y3D5 142 aaKnown RBP13.77□□□□□ -0.21
PKP4-205ENST00000426248 A0A1B0GUS0 222 aa13.77□□□□□ -0.21
PKP4-205ENST00000426248 BPNT1O95861 308 aa13.77□□□□□ -0.21
PKP4-205ENST00000426248 HSPB1P04792 205 aaKnown RBP13.77□□□□□ -0.21
PKP4-205ENST00000426248 BRS3P32247 399 aa13.77□□□□□ -0.21
PKP4-205ENST00000426248 PTGDSP41222 190 aa13.77□□□□□ -0.21
PKP4-205ENST00000426248 UBE2NP61088 152 aaKnown RBP13.77□□□□□ -0.21
PKP4-205ENST00000426248 ADPRHL1Q8NDY3 354 aa13.77□□□□□ -0.21
PKP4-205ENST00000426248 IL1F10Q8WWZ1 152 aa13.77□□□□□ -0.21
PKP4-205ENST00000426248 RBMXL1Q96E39 390 aaKnown RBP13.77□□□□□ -0.21
PKP4-205ENST00000426248 HINT2Q9BX68 163 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms