RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 REG4Q9BYZ8 158 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 SEBOXQ9HB31 216 aaPredicted RBP13.03□□□□□ -0.32
SHOX2-202ENST00000425436 U3KQ87 197 aa13.03□□□□□ -0.32
SHOX2-202ENST00000425436 FLNAP21333 2647 aaKnown RBP13.02□□□□□ -0.33
SHOX2-202ENST00000425436 FXYD6-FXYD2A0A087WZ82 144 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 LRRC30A6NM36 301 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 FAM25EA8MYX2 175 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 IFNL4K9M1U5 179 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 SMAD7O15105 426 aaKnown RBP13.02□□□□□ -0.33
SHOX2-202ENST00000425436 OR2H2O95918 312 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 PPYP01298 95 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 IRF2P14316 349 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 PI3P19957 117 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 S100A11P31949 105 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 CFHR2P36980 270 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 OPCMLQ14982 345 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 SLC9A3R2Q15599 337 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 C11orf87Q6NUJ2 197 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 WDR82Q6UXN9 313 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 SPNS3Q6ZMD2 512 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 ZNF546Q86UE3 836 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 FAM90A1Q86YD7 464 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 GAPTQ8N292 157 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 OR11L1Q8NGX0 322 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 OR10Z1Q8NGY1 313 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 MRPL30Q8TCC3 161 aaKnown RBP13.02□□□□□ -0.33
SHOX2-202ENST00000425436 ERGIC1Q969X5 290 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 FAM210AQ96ND0 272 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 RSRP1Q9BUV0 290 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 FXYD6Q9H0Q3 95 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 METTL8Q9H825 291 aaKnown RBP13.02□□□□□ -0.33
SHOX2-202ENST00000425436 TMEM165Q9HC07 324 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 RNF7Q9UBF6 113 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 IL36RNQ9UBH0 155 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 WIPI2Q9Y4P8 454 aa13.02□□□□□ -0.33
SHOX2-202ENST00000425436 IGHV4-61A0A0C4DH41 118 aa13.01□□□□□ -0.33
SHOX2-202ENST00000425436 IFNA21P01568 189 aa13.01□□□□□ -0.33
SHOX2-202ENST00000425436 PSMB6P28072 239 aa13.01□□□□□ -0.33
SHOX2-202ENST00000425436 PIGPP57054 158 aa13.01□□□□□ -0.33
SHOX2-202ENST00000425436 OR5T2Q8NGG2 359 aa13.01□□□□□ -0.33
SHOX2-202ENST00000425436 Q8TCH9 128 aa13.01□□□□□ -0.33
SHOX2-202ENST00000425436 LRRC29Q8WV35 223 aa13.01□□□□□ -0.33
SHOX2-202ENST00000425436 RTN4IP1Q8WWV3 396 aaPredicted RBP13.01□□□□□ -0.33
SHOX2-202ENST00000425436 RAB1CQ92928 201 aa13.01□□□□□ -0.33
SHOX2-202ENST00000425436 MFFQ9GZY8 342 aa13.01□□□□□ -0.33
SHOX2-202ENST00000425436 NAA60Q9H7X0 242 aa13.01□□□□□ -0.33
SHOX2-202ENST00000425436 CR1P17927 2039 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 C13orf42A0A1B0GVH6 325 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 SLC33A1O00400 549 aaPredicted RBP13□□□□□ -0.33
SHOX2-202ENST00000425436 ARPC5O15511 151 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 OR2F2O95006 317 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 HAND1O96004 215 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 PET100P0DJ07 73 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 SLC25A16P16260 332 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 EGR1P18146 543 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 CXCL2P19875 107 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 AADACP22760 399 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 S100A1P23297 94 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 S100GP29377 79 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 RND3P61587 244 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 SRPXP78539 464 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 OR2F1Q13607 317 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 SMIM21Q3B7S5 101 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 ZNF497Q6ZNH5 498 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 GCSAMQ8N6F7 178 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 ZNF565Q8N9K5 539 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 DEFB108BQ8NET1 73 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 PPP1R1CQ8WVI7 109 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 TOMM40LQ969M1 308 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 WDR89Q96FK6 387 aaPredicted RBP13□□□□□ -0.33
SHOX2-202ENST00000425436 TIMD4Q96H15 378 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 SEC22AQ96IW7 307 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 C2orf50Q96LR7 162 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 HEXA-AS1Q9H8Q6 139 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 ZANQ9Y493 2812 aa13□□□□□ -0.33
SHOX2-202ENST00000425436 NPIPB11E5RHQ5 1161 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 TUSC2O75896 110 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 LHBP01229 141 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 USF1P22415 310 aaPredicted RBP12.99□□□□□ -0.33
SHOX2-202ENST00000425436 CD80P33681 288 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 FXYD4P59646 89 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 HLA-DRB3P79483 266 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 ZNF345Q14585 488 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 ANKRD55Q3KP44 614 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 IGSF11Q5DX21 431 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 ACP7Q6ZNF0 438 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 TMUB2Q71RG4 321 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 C1orf87Q8N0U7 546 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 LRTM2Q8N967 370 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 ZNF680Q8NEM1 530 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 OR10J5Q8NHC4 309 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 CABLES2Q9BTV7 478 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 MAB21L2Q9Y586 359 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 HIVEP1P15822 2718 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 YLPM1P49750 1951 aaKnown RBP12.99□□□□□ -0.33
SHOX2-202ENST00000425436 ACANP16112 2415 aa12.99□□□□□ -0.33
SHOX2-202ENST00000425436 PPIAL4EA0A075B759 164 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 IGHV3OR15-7A0A075B7D8 119 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 A0A096LNT2 108 aa12.98□□□□□ -0.33
SHOX2-202ENST00000425436 TRAV14DV4A0A0A6YYC5 116 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms