RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ROS1P08922 2347 aa22.11■■□□□ 1.13
LDB1-202ENST00000425280 DSCAMO60469 2012 aa22.11■■□□□ 1.13
LDB1-202ENST00000425280 NBASA2RRP1 2371 aa22.1■■□□□ 1.13
LDB1-202ENST00000425280 ODAMA1E959 279 aa22.1■■□□□ 1.13
LDB1-202ENST00000425280 MEX3AA1L020 520 aaKnown RBP22.1■■□□□ 1.13
LDB1-202ENST00000425280 SIAH2O43255 324 aa22.1■■□□□ 1.13
LDB1-202ENST00000425280 KCNAB3O43448 404 aa22.1■■□□□ 1.13
LDB1-202ENST00000425280 OR8U9P0C7N5 309 aa22.1■■□□□ 1.13
LDB1-202ENST00000425280 S100GP29377 79 aa22.1■■□□□ 1.13
LDB1-202ENST00000425280 FAM209AQ5JX71 171 aa22.1■■□□□ 1.13
LDB1-202ENST00000425280 FAM53AQ6NSI3 398 aaPredicted RBP22.1■■□□□ 1.13
LDB1-202ENST00000425280 INO80EQ8NBZ0 244 aaPredicted RBP22.1■■□□□ 1.13
LDB1-202ENST00000425280 OR8U1Q8NH10 309 aa22.1■■□□□ 1.13
LDB1-202ENST00000425280 ARL11Q969Q4 196 aa22.1■■□□□ 1.13
LDB1-202ENST00000425280 RBM7Q9Y580 266 aaKnown RBP22.1■■□□□ 1.13
LDB1-202ENST00000425280 C15orf65H3BRN8 121 aa22.1■■□□□ 1.13
LDB1-202ENST00000425280 UCP1P25874 307 aa22.1■■□□□ 1.13
LDB1-202ENST00000425280 S100A10P60903 97 aa22.1■■□□□ 1.13
LDB1-202ENST00000425280 GNMTQ14749 295 aa22.1■■□□□ 1.13
LDB1-202ENST00000425280 TRAT1Q6PIZ9 186 aa22.1■■□□□ 1.13
LDB1-202ENST00000425280 ZNF561Q8N587 486 aa22.1■■□□□ 1.13
LDB1-202ENST00000425280 DEFB108BQ8NET1 73 aa22.1■■□□□ 1.13
LDB1-202ENST00000425280 SDSLQ96GA7 329 aa22.1■■□□□ 1.13
LDB1-202ENST00000425280 TOLLIPQ9H0E2 274 aa22.1■■□□□ 1.13
LDB1-202ENST00000425280 NBEAQ8NFP9 2946 aa22.09■■□□□ 1.13
LDB1-202ENST00000425280 H0Y980 276 aa22.09■■□□□ 1.13
LDB1-202ENST00000425280 SELLP14151 372 aa22.09■■□□□ 1.13
LDB1-202ENST00000425280 F2RP25116 425 aa22.09■■□□□ 1.13
LDB1-202ENST00000425280 APOBEC3AP31941 199 aaPredicted RBP22.09■■□□□ 1.13
LDB1-202ENST00000425280 BEX5Q5H9J7 111 aa22.09■■□□□ 1.13
LDB1-202ENST00000425280 SELENOHQ8IZQ5 122 aaKnown RBP22.09■■□□□ 1.13
LDB1-202ENST00000425280 AKR1E2Q96JD6 320 aa22.09■■□□□ 1.13
LDB1-202ENST00000425280 EGLN1Q9GZT9 426 aa22.09■■□□□ 1.13
LDB1-202ENST00000425280 TMED3Q9Y3Q3 217 aa22.09■■□□□ 1.13
LDB1-202ENST00000425280 RNF115Q9Y4L5 304 aa22.09■■□□□ 1.13
LDB1-202ENST00000425280 CDS2O95674 445 aa22.08■■□□□ 1.13
LDB1-202ENST00000425280 MST1LQ2TV78 715 aa22.08■■□□□ 1.13
LDB1-202ENST00000425280 TEX36Q5VZQ5 186 aa22.08■■□□□ 1.13
LDB1-202ENST00000425280 RRNAD1Q96FB5 475 aaKnown RBP22.08■■□□□ 1.13
LDB1-202ENST00000425280 SAP30LQ9HAJ7 183 aa22.08■■□□□ 1.13
LDB1-202ENST00000425280 KCNS2Q9ULS6 477 aa22.08■■□□□ 1.13
LDB1-202ENST00000425280 RAI1Q7Z5J4 1906 aaPredicted RBP22.08■■□□□ 1.12
LDB1-202ENST00000425280 A0A1B0GW55 424 aa22.08■■□□□ 1.12
LDB1-202ENST00000425280 DUX4L2P0CJ85 424 aa22.08■■□□□ 1.12
LDB1-202ENST00000425280 DUX4L3P0CJ86 424 aa22.08■■□□□ 1.12
LDB1-202ENST00000425280 DUX4L4P0CJ87 422 aa22.08■■□□□ 1.12
LDB1-202ENST00000425280 DUX4L5P0CJ88 424 aa22.08■■□□□ 1.12
LDB1-202ENST00000425280 DUX4L6P0CJ89 424 aa22.08■■□□□ 1.12
LDB1-202ENST00000425280 DUX4L7P0CJ90 424 aa22.08■■□□□ 1.12
LDB1-202ENST00000425280 PET100P0DJ07 73 aa22.08■■□□□ 1.12
LDB1-202ENST00000425280 P2RX3P56373 397 aa22.08■■□□□ 1.12
LDB1-202ENST00000425280 DUX4L9Q6RFH8 374 aaPredicted RBP22.08■■□□□ 1.12
LDB1-202ENST00000425280 ZNF695Q8IW36 515 aa22.08■■□□□ 1.12
LDB1-202ENST00000425280 OR1S1Q8NH92 325 aa22.08■■□□□ 1.12
LDB1-202ENST00000425280 RFESDQ8TAC1 157 aa22.08■■□□□ 1.12
LDB1-202ENST00000425280 CNTNAP3BQ96NU0 1288 aa22.08■■□□□ 1.12
LDB1-202ENST00000425280 GAFA1Q96PS6 74 aa22.08■■□□□ 1.12
LDB1-202ENST00000425280 CNTNAP3Q9BZ76 1288 aa22.08■■□□□ 1.12
LDB1-202ENST00000425280 DUX4Q9UBX2 424 aa22.08■■□□□ 1.12
LDB1-202ENST00000425280 UBQLN2Q9UHD9 624 aa22.08■■□□□ 1.12
LDB1-202ENST00000425280 PKD1L2Q7Z442 2459 aa22.07■■□□□ 1.12
LDB1-202ENST00000425280 TUBAL3A6NHL2 446 aa22.07■■□□□ 1.12
LDB1-202ENST00000425280 WNT2P09544 360 aa22.07■■□□□ 1.12
LDB1-202ENST00000425280 MUC1P15941 1255 aaPredicted RBP22.07■■□□□ 1.12
LDB1-202ENST00000425280 EFNB3Q15768 340 aa22.07■■□□□ 1.12
LDB1-202ENST00000425280 CR1LQ2VPA4 569 aa22.07■■□□□ 1.12
LDB1-202ENST00000425280 OR5D13Q8NGL4 314 aa22.07■■□□□ 1.12
LDB1-202ENST00000425280 DYNLRB1Q9NP97 96 aa22.07■■□□□ 1.12
LDB1-202ENST00000425280 LRRC30A6NM36 301 aa22.07■■□□□ 1.12
LDB1-202ENST00000425280 SPINT2O43291 252 aa22.07■■□□□ 1.12
LDB1-202ENST00000425280 GYPAP02724 150 aa22.07■■□□□ 1.12
LDB1-202ENST00000425280 TFF3Q07654 80 aa22.07■■□□□ 1.12
LDB1-202ENST00000425280 FOXRED2Q8IWF2 684 aa22.07■■□□□ 1.12
LDB1-202ENST00000425280 OR8H3Q8N146 312 aa22.07■■□□□ 1.12
LDB1-202ENST00000425280 OR51H1Q8NH63 302 aa22.07■■□□□ 1.12
LDB1-202ENST00000425280 NINJ1Q92982 152 aa22.07■■□□□ 1.12
LDB1-202ENST00000425280 DIDO1Q9BTC0 2240 aaKnown RBP22.06■■□□□ 1.12
LDB1-202ENST00000425280 GZMHP20718 246 aa22.06■■□□□ 1.12
LDB1-202ENST00000425280 PPP1CCP36873 323 aaKnown RBP22.06■■□□□ 1.12
LDB1-202ENST00000425280 EDDM3BP56851 147 aa22.06■■□□□ 1.12
LDB1-202ENST00000425280 SLC51BQ86UW2 128 aa22.06■■□□□ 1.12
LDB1-202ENST00000425280 DRAM1Q8N682 238 aa22.06■■□□□ 1.12
LDB1-202ENST00000425280 CCL13Q99616 98 aa22.06■■□□□ 1.12
LDB1-202ENST00000425280 OR2S2Q9NQN1 319 aa22.06■■□□□ 1.12
LDB1-202ENST00000425280 CISD1Q9NZ45 108 aaKnown RBP22.06■■□□□ 1.12
LDB1-202ENST00000425280 RELNP78509 3460 aa22.06■■□□□ 1.12
LDB1-202ENST00000425280 BCL2L11O43521 198 aa22.05■■□□□ 1.12
LDB1-202ENST00000425280 ZNF788Q6ZQV5 615 aa22.05■■□□□ 1.12
LDB1-202ENST00000425280 ZNF665Q9H7R5 613 aa22.05■■□□□ 1.12
LDB1-202ENST00000425280 KANTRA0A1W2PQU2 76 aa22.05■■□□□ 1.12
LDB1-202ENST00000425280 B9A039 149 aa22.05■■□□□ 1.12
LDB1-202ENST00000425280 PLA2G5P39877 138 aa22.05■■□□□ 1.12
LDB1-202ENST00000425280 HTD2P86397 168 aa22.05■■□□□ 1.12
LDB1-202ENST00000425280 OR52M1Q8NGK5 317 aa22.05■■□□□ 1.12
LDB1-202ENST00000425280 MS4A5Q9H3V2 200 aa22.05■■□□□ 1.12
LDB1-202ENST00000425280 NCOR1P1Q9H4R4 102 aa22.05■■□□□ 1.12
LDB1-202ENST00000425280 TPRP12270 2363 aaKnown RBP22.04■■□□□ 1.12
LDB1-202ENST00000425280 IGHV3-43A0A0B4J1X8 118 aa22.04■■□□□ 1.12
LDB1-202ENST00000425280 B3GALNT1O75752 331 aa22.04■■□□□ 1.12
LDB1-202ENST00000425280 MBPP02686 304 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms