RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 EMX2Q04743 252 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 IL15RAQ13261 267 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 RGNQ15493 299 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 KRTAP27-1Q3LI81 207 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 FBXL19-AS1Q494R0 122 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 SCGB2B2Q4G0G5 96 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 C6orf99Q4VX62 202 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 KDM4DQ6B0I6 523 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 LCN8Q6JVE9 175 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 ZNF343Q6P1L6 599 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 Q6ZRP5 223 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 VN1R4Q7Z5H5 301 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 TMEM252Q8N6L7 170 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 ZNF615Q8N8J6 731 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 GDPD1Q8N9F7 314 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 CSNK1G2-AS1Q8NCQ2 148 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 GPR146Q96CH1 333 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 SLC45A3Q96JT2 553 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 CCDC115Q96NT0 180 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 SPACA5Q96QH8 159 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 OR5M11Q96RB7 305 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 SERPINI1Q99574 410 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 C1orf50Q9BV19 199 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 LRRC61Q9BV99 259 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 MRPL20Q9BYC9 149 aaKnown RBP2.82□□□□□ -1.96
SF3B1-205ENST00000424674 POLR2J2Q9GZM3 115 aaKnown RBP2.82□□□□□ -1.96
SF3B1-205ENST00000424674 CHST6Q9GZX3 395 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 POLR2J3Q9H1A7 115 aaKnown RBP2.82□□□□□ -1.96
SF3B1-205ENST00000424674 SLC25A22Q9H936 323 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 RBFOX1Q9NWB1 397 aaKnown RBP2.82□□□□□ -1.96
SF3B1-205ENST00000424674 ENPP4Q9Y6X5 453 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 KIF15Q9NS87 1388 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 PTPRKQ15262 1439 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 POGZQ7Z3K3 1410 aa2.82□□□□□ -1.96
SF3B1-205ENST00000424674 IGLV4-3A0A075B6K6 122 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 A0A087WX48 190 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 SMIM26A0A096LP01 95 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 TRAV8-1A0A0A6YYK1 113 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 IGHV6-1A0A0B4J1U7 121 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 IGHV2-26A0A0B4J1V2 119 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 TRAV26-2A0A0B4J265 109 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 IGHV3-16A0A0C4DH30 117 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 A0A0G2JN53 185 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 SIGLEC16A6NMB1 481 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 KNCNA6PVL3 124 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 CYSRT1A8MQ03 144 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 MPTX1A8MV57 137 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 F5H5P2 479 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.81□□□□□ -1.96
SF3B1-205ENST00000424674 K7ERU9 68 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 FFAR1O14842 300 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 PPP1R3DO95685 299 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 S100A8P05109 93 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 FABP3P05413 133 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 S100A7P31151 101 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 BTCP35070 178 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 CD200P41217 278 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 CTBP2P56545 445 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 WNT4P56705 351 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 KLF3P57682 345 aaPredicted RBP2.81□□□□□ -1.96
SF3B1-205ENST00000424674 SNRPD2P62316 118 aaKnown RBP2.81□□□□□ -1.96
SF3B1-205ENST00000424674 ELF3P78545 371 aaPredicted RBP2.81□□□□□ -1.96
SF3B1-205ENST00000424674 PNOCQ13519 176 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 LRRC10Q5BKY1 277 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 MESTQ5EB52 335 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 RNASE10Q5GAN6 216 aaKnown RBP2.81□□□□□ -1.96
SF3B1-205ENST00000424674 UBE2NLQ5JXB2 153 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 FAM182AQ5T1J6 154 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 IBA57Q5T440 356 aaKnown RBP2.81□□□□□ -1.96
SF3B1-205ENST00000424674 FAM222AQ5U5X8 452 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 GFI1BQ5VTD9 330 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 C9orf57Q5W0N0 161 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 FAM53AQ6NSI3 398 aaPredicted RBP2.81□□□□□ -1.96
SF3B1-205ENST00000424674 ZNF493Q6ZR52 646 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 Q6ZRU5 148 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 KLHDC8BQ8IXV7 354 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 CIARTQ8N365 385 aaPredicted RBP2.81□□□□□ -1.96
SF3B1-205ENST00000424674 ANKRD29Q8N6D5 301 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 LY6G5BQ8NDX9 201 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 OR8B12Q8NGG6 310 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 OR1L1Q8NH94 360 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 DCAKDQ8WVC6 231 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 OR5P3Q8WZ94 311 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 FRZBQ92765 325 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 APOBEC3DQ96AK3 386 aaPredicted RBP2.81□□□□□ -1.96
SF3B1-205ENST00000424674 ZNF689Q96CS4 500 aaPredicted RBP2.81□□□□□ -1.96
SF3B1-205ENST00000424674 PLEKHB2Q96CS7 222 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 STARD4Q96DR4 205 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 NEURL3Q96EH8 262 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 SLC25A44Q96H78 314 aaPredicted RBP2.81□□□□□ -1.96
SF3B1-205ENST00000424674 SIGLEC12Q96PQ1 595 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 OR2M2Q96R28 347 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 DOHHQ9BU89 302 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 OR52D1Q9H346 318 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 COA4Q9NYJ1 87 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 LAMTOR3Q9UHA4 124 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 LINC00527Q9UJ94 153 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 HSPB8Q9UJY1 196 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 BTRCQ9Y297 605 aa2.81□□□□□ -1.96
SF3B1-205ENST00000424674 FLVCR1Q9Y5Y0 555 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms