RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 FAM58AQ8N1B3 248 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 OR4X1Q8NH49 305 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 NEK7Q8TDX7 302 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 TAF15Q92804 592 aaKnown RBP eCLIP12.94□□□□□ -0.341e-6■■■■□ 22
C9orf3-204ENST00000424143 SSX3Q99909 188 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 C2orf88Q9BSF0 95 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 MRPL37Q9BZE1 423 aaKnown RBP12.94□□□□□ -0.34
C9orf3-204ENST00000424143 MAP1LC3BQ9GZQ8 125 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 MANBALQ9NQG1 85 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 PRDM6Q9NQX0 595 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 CACNG5Q9UF02 275 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 PRSS50Q9UI38 385 aa12.94□□□□□ -0.34
C9orf3-204ENST00000424143 REV3LO60673 3130 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 CCDC163A0A0D9SF12 145 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 ZFP92A6NM28 416 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 G3V3Y1 287 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 MRPL33O75394 65 aaKnown RBP12.93□□□□□ -0.34
C9orf3-204ENST00000424143 VENTXO95231 258 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 IGKV1-5P01602 117 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 IL2RGP31785 369 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 CXCL12P48061 93 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 PRSS12P56730 875 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 ARL16Q0P5N6 197 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 TMEM267Q0VDI3 215 aaPredicted RBP12.93□□□□□ -0.34
C9orf3-204ENST00000424143 GAMTQ14353 236 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 GFI1BQ5VTD9 330 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 LYSMD4Q5XG99 296 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 P4HA3Q7Z4N8 544 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 TCTEX1D1Q8N7M0 179 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 RNASE11Q8TAA1 199 aaKnown RBP12.93□□□□□ -0.34
C9orf3-204ENST00000424143 RAB24Q969Q5 203 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 RSG1Q9BU20 258 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 TMEM9BQ9NQ34 198 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 DLL3Q9NYJ7 618 aa12.93□□□□□ -0.34
C9orf3-204ENST00000424143 ERRFI1Q9UJM3 462 aaPredicted RBP12.93□□□□□ -0.34
C9orf3-204ENST00000424143 CTXND1A0A1B0GTU2 59 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 J3QW42 95 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 ZNF737O75373 536 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 LY86O95711 162 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 IGLV2-14P01704 120 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 PGA5P0DJD9 388 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 FABP4P15090 132 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 HOXA6P31267 233 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 SRP14P37108 136 aaKnown RBP12.92□□□□□ -0.34
C9orf3-204ENST00000424143 FAM3BP58499 235 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-204ENST00000424143 MEF2BQ02080 365 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-204ENST00000424143 TESK1Q15569 626 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 ZNF585BQ52M93 769 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 NCR3LG1Q68D85 454 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 Q6P435 159 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 LCN15Q6UWW0 184 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 Q8IYB0 196 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 NAXEQ8NCW5 288 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 OR51G1Q8NGK1 321 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 OR1P1Q8NH06 330 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 S100PBPQ96BU1 408 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 POM121L2Q96KW2 1035 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 HS3ST6Q96QI5 342 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 OR4C12Q96R67 309 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 IER2Q9BTL4 223 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 GPR87Q9BY21 358 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 SLC39A9Q9NUM3 307 aa12.92□□□□□ -0.34
C9orf3-204ENST00000424143 ARGFXA6NJG6 315 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 CEBPZOSA8MTT3 80 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 HLA-HP01893 362 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 DUSP3P51452 185 aaPredicted RBP12.91□□□□□ -0.34
C9orf3-204ENST00000424143 BSXQ3C1V8 233 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 CDPF1Q6NVV7 123 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 C20orf204Q6ZNR8 217 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 IFI44Q8TCB0 444 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 TMEM170AQ8WVE7 144 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 WIPI2Q9Y4P8 454 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 A0A0G2JMM0 328 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 A0A1W2PPB8 328 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 A0A1W2PRS3 328 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 ANKRD30BLA7E2S9 258 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 KIR3DP1A8MWS1 328 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 B4E171 279 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 J3QT63 122 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 SLC31A2O15432 143 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 SYNGR1O43759 233 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 GGCTO75223 188 aaKnown RBP12.91□□□□□ -0.34
C9orf3-204ENST00000424143 METTL15P1P0C7V9 234 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 P0C879 139 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 CD99P14209 185 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 TSPAN7P41732 249 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 PSMB3P49720 205 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 RAB4BP61018 213 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 ACOT6Q3I5F7 207 aaPredicted RBP12.91□□□□□ -0.34
C9orf3-204ENST00000424143 ZNF497Q6ZNH5 498 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 SSX9Q7RTT3 188 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 LILRB2Q8N423 598 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 LHX4Q969G2 390 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 OR5B12Q96R08 314 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 IMMP2LQ96T52 175 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 SMIM7Q9BQ49 75 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 OR51I2Q9H344 312 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 VSIRQ9H7M9 311 aa12.91□□□□□ -0.34
C9orf3-204ENST00000424143 MBNL3Q9NUK0 354 aaKnown RBP12.91□□□□□ -0.34
C9orf3-204ENST00000424143 HSPB7Q9UBY9 170 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms