RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ARPC4-TTLL3A0A0A6YYG9 625 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 G6PCP35575 357 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 SURF2Q15527 256 aaPredicted RBP10.06□□□□□ -0.8
PTPRN-204ENST00000423636 PRR30Q53SZ7 412 aaPredicted RBP10.06□□□□□ -0.8
PTPRN-204ENST00000423636 CMTM1Q8IZ96 169 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 OR2C3Q8N628 320 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 GPR146Q96CH1 333 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 OR2D2Q9H210 308 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 TMEM100Q9NV29 134 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 ZNF391Q9UJN7 358 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 E5RGE8 158 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 HAND1O96004 215 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 SPANXN5Q5MJ07 72 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 Q6P435 159 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 CCDC71LQ8N9Z2 235 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 OR2G3Q8NGZ4 309 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 S100PBPQ96BU1 408 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 PIGMQ9H3S5 423 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 PCDHB16Q9NRJ7 776 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 CLCF1Q9UBD9 225 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 CUBNO60494 3623 aa10.06□□□□□ -0.8
PTPRN-204ENST00000423636 RNASEK-C17orf49H0YIS7 233 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 M0R036 132 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 IGKV1-39P01597 117 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 IGKV1D-39P04432 117 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 EGR1P18146 543 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 AKR1D1P51857 326 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 RTL6Q6ICC9 239 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 FIP1L1Q6UN15 594 aaKnown RBP10.05□□□□□ -0.8
PTPRN-204ENST00000423636 Q6ZT83 130 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 CISD2Q8N5K1 135 aaKnown RBP10.05□□□□□ -0.8
PTPRN-204ENST00000423636 IP6K3Q96PC2 410 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 GP6Q9HCN6 339 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 IL36GQ9NZH8 169 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 ARHGAP32A7KAX9 2087 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 TRAV17A0A0B4J275 112 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 H7C1Q1 480 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 J3QT63 122 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 ARG1P05089 322 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 IL2RGP31785 369 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 TESK1Q15569 626 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 FAM76BQ5HYJ3 339 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 STARD4Q96DR4 205 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 DNTTIP1Q9H147 329 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 TUBD1Q9UJT1 453 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 OR2W1Q9Y3N9 320 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 CSMD2Q7Z408 3487 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 ATP6V0CP27449 155 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 ELLP55199 621 aaPredicted RBP10.05□□□□□ -0.8
PTPRN-204ENST00000423636 RPL30P62888 115 aaKnown RBP10.05□□□□□ -0.8
PTPRN-204ENST00000423636 FOXC1Q12948 553 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 MRPL49Q13405 166 aaKnown RBP10.05□□□□□ -0.8
PTPRN-204ENST00000423636 ZNF324BQ6AW86 544 aaPredicted RBP10.05□□□□□ -0.8
PTPRN-204ENST00000423636 IQCF2Q8IXL9 164 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 LRRC29Q8WV35 223 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 VSIRQ9H7M9 311 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 TAAR3PQ9P1P4 343 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 MPC1Q9Y5U8 109 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 DSCAMO60469 2012 aa10.05□□□□□ -0.8
PTPRN-204ENST00000423636 IGHV1-18A0A0C4DH31 117 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 CDK2AP1O14519 115 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 FGF16O43320 207 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 HLA-DRB3P79483 266 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 COL10A1Q03692 680 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 PJVKQ0ZLH3 352 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 ACSF3Q4G176 576 aaPredicted RBP10.04□□□□□ -0.8
PTPRN-204ENST00000423636 THNSL2Q86YJ6 484 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 TMEM252Q8N6L7 170 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 OR13A1Q8NGR1 328 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 GALNT14Q96FL9 552 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 PUS1Q9Y606 427 aaKnown RBP eCLIP10.04□□□□□ -0.8
PTPRN-204ENST00000423636 TANC2Q9HCD6 1990 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 ANKHD1Q8IWZ3 2542 aaKnown RBP10.04□□□□□ -0.8
PTPRN-204ENST00000423636 CBR1P16152 277 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 F2RP25116 425 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 GCH1P30793 250 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 MOGAT3Q86VF5 341 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 SPACA1Q9HBV2 294 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 RPS10P5Q9NQ39 176 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 PURGQ9UJV8 347 aaKnown RBP10.04□□□□□ -0.8
PTPRN-204ENST00000423636 PSG11Q9UQ72 335 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 C12orf77C9JDV5 145 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 TNFSF13O75888 250 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 IGLV2-14P01704 120 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 OPN1MWP04001 364 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 OPN1MW2P0DN77 364 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 OPN1MW3P0DN78 364 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 ARL16Q0P5N6 197 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 ZNF474Q6S9Z5 364 aaPredicted RBP10.04□□□□□ -0.8
PTPRN-204ENST00000423636 ODF3L1Q8IXM7 274 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 PRSS33Q8NF86 280 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 SFT2D1Q8WV19 159 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 ZDHHC16Q969W1 377 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 BOD1Q96IK1 185 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 NRIP2Q9BQI9 281 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 AIFM2Q9BRQ8 373 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 DECR2Q9NUI1 292 aa10.04□□□□□ -0.8
PTPRN-204ENST00000423636 KIR2DS1A0A191URI9 304 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 TUBAL3A6NHL2 446 aa10.03□□□□□ -0.8
PTPRN-204ENST00000423636 SS18L1O75177 396 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 201.6 ms