RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TAS2R20P59543 309 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 GNG2P59768 71 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 HMGN3Q15651 99 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 PNLIPRP3Q17RR3 467 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 TUSC1Q2TAM9 212 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 MIDNQ504T8 468 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 TMEM69Q5SWH9 247 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 LDLRAD2Q5SZI1 272 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 FOXB2Q5VYV0 432 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 ZNF626Q68DY1 528 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 MOB1BQ7L9L4 216 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 LHFPL4Q7Z7J7 247 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 ZNF554Q86TJ5 538 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 OR52M1Q8NGK5 317 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 OR9G1Q8NH87 305 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 NUDCD2Q8WVJ2 157 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 IL1F10Q8WWZ1 152 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 GALMQ96C23 342 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 DGCR14Q96DF8 476 aaKnown RBP7.53□□□□□ -1.2
PDGFC-202ENST00000422544 AJUBAQ96IF1 538 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 ST6GALNAC5Q9BVH7 336 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 SLIRPQ9GZT3 109 aaKnown RBP7.53□□□□□ -1.2
PDGFC-202ENST00000422544 MIXL1Q9H2W2 232 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 RAB9BQ9NP90 201 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 OR2S2Q9NQN1 319 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 GFOD1Q9NXC2 390 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 NDUFA13Q9P0J0 144 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 ZNRD1Q9P1U0 126 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 GNG12Q9UBI6 72 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 PSG11Q9UQ72 335 aa7.53□□□□□ -1.2
PDGFC-202ENST00000422544 DSCAML1Q8TD84 2053 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 J3QR06 171 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 RGS5O15539 181 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 WIPF1O43516 503 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 IFNA2P01563 188 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 IGLV1-47P01700 117 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 HLA-DQB1P01920 261 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 FCER2P06734 321 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 GSTT2P0CG29 244 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 GSTT2BP0CG30 244 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 HLA-DRB3P79483 266 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 HTD2P86397 168 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 PITPNAQ00169 270 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 SRSF2Q01130 221 aaKnown RBP7.52□□□□□ -1.21
PDGFC-202ENST00000422544 GNMTQ14749 295 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 RBMS3Q6XE24 437 aaKnown RBP7.52□□□□□ -1.21
PDGFC-202ENST00000422544 OR4P4Q8NGL7 312 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 MCFD2Q8NI22 146 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 ZNF596Q8TC21 504 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 ZNF418Q8TF45 676 aaPredicted RBP7.52□□□□□ -1.21
PDGFC-202ENST00000422544 GCDHQ92947 438 aaPredicted RBP7.52□□□□□ -1.21
PDGFC-202ENST00000422544 C6orf62Q9GZU0 229 aaPredicted RBP7.52□□□□□ -1.21
PDGFC-202ENST00000422544 MGAT4AQ9UM21 535 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 MGAM2Q2M2H8 2515 aa7.52□□□□□ -1.21
PDGFC-202ENST00000422544 IGKV1D-8A0A087WSZ0 117 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 IGKV1-6A0A0C4DH72 117 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 MEIS3P1A6NDR6 274 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 BUB1B-PAK6H3BSN5 160 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 SLC31A2O15432 143 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 FABP7O15540 132 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 TCF21O43680 179 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 VENTXO95231 258 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 FBP1P09467 338 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 DTYMKP23919 212 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 HTR1DP28221 377 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 PPP1CCP36873 323 aaKnown RBP7.51□□□□□ -1.21
PDGFC-202ENST00000422544 KIR2DS4P43632 304 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 ZNF134P52741 427 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 BAMBIQ13145 260 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 KIR2DS1Q14954 304 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 SSX2Q16385 188 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 SRSF7Q16629 238 aaKnown RBP eCLIP7.51□□□□□ -1.21
PDGFC-202ENST00000422544 HLA-DRB5Q30154 266 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 TMEM30BQ3MIR4 351 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 MORN2Q502X0 79 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 IGSF11Q5DX21 431 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 CT45A1Q5HYN5 189 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 MINOS1Q5TGZ0 78 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 Q6YL49 198 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 SNX29P2Q8IUI4 249 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 LAX1Q8IWV1 398 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 DYNAPQ8N1N2 210 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 GVQW1Q8N7I0 195 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 BEND2Q8NDZ0 799 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 OR10X1Q8NGY0 326 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 CT45A3Q8NHU0 189 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 MALSU1Q96EH3 234 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 DUX5Q96PT3 197 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 NXF2Q9GZY0 626 aaKnown RBP7.51□□□□□ -1.21
PDGFC-202ENST00000422544 MMP28Q9H239 520 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 PRDM13Q9H4Q3 707 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 TNFRSF19Q9NS68 423 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 OR1A1Q9P1Q5 309 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 DPM3Q9P2X0 92 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 EXTL2Q9UBQ6 330 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 SLC23A1Q9UHI7 598 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 JPT1Q9UK76 154 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 TBL2Q9Y4P3 447 aaKnown RBP7.51□□□□□ -1.21
PDGFC-202ENST00000422544 HILPDAQ9Y5L2 63 aa7.51□□□□□ -1.21
PDGFC-202ENST00000422544 MINOS1-NBL1R4GNA1 71 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms