RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 ERVFC1-1P60608 527 aa14.22□□□□□ -0.13
PKP4-204ENST00000421462 TOMM20LQ6UXN7 152 aa14.22□□□□□ -0.13
PKP4-204ENST00000421462 TCF23Q7RTU1 214 aa14.22□□□□□ -0.13
PKP4-204ENST00000421462 RPP25LQ8N5L8 163 aaKnown RBP14.22□□□□□ -0.13
PKP4-204ENST00000421462 OR5L2Q8NGL0 311 aa14.22□□□□□ -0.13
PKP4-204ENST00000421462 IGKV1-6A0A0C4DH72 117 aa14.22□□□□□ -0.13
PKP4-204ENST00000421462 SYNGR2O43760 224 aa14.22□□□□□ -0.13
PKP4-204ENST00000421462 IGFBP7Q16270 282 aa14.22□□□□□ -0.13
PKP4-204ENST00000421462 TMPRSS7Q7RTY8 843 aa14.22□□□□□ -0.13
PKP4-204ENST00000421462 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.22□□□□□ -0.13
PKP4-204ENST00000421462 ZNF525Q8N782 197 aa14.22□□□□□ -0.13
PKP4-204ENST00000421462 ZNF501Q96CX3 271 aaPredicted RBP14.22□□□□□ -0.13
PKP4-204ENST00000421462 RASL10BQ96S79 203 aa14.22□□□□□ -0.13
PKP4-204ENST00000421462 PAM16Q9Y3D7 125 aa14.22□□□□□ -0.13
PKP4-204ENST00000421462 B4E171 279 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 DUX1O43812 170 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 ZFAND5O76080 213 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 PDGFBP01127 241 aaPredicted RBP14.21□□□□□ -0.13
PKP4-204ENST00000421462 TSPAN7P41732 249 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 PSMB3P49720 205 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 CNN1P51911 297 aaKnown RBP14.21□□□□□ -0.13
PKP4-204ENST00000421462 FUT6P51993 359 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 HAPLN4Q86UW8 402 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 OR10G4Q8NGN3 311 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 TMEM170AQ8WVE7 144 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 GPR27Q9NS67 375 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 IGHV3-64DA0A0J9YX35 117 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 PAGE4O60829 102 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 CLDN1O95832 211 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 HRASP01112 189 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 GYPAP02724 150 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 F2RP25116 425 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 TFPI2P48307 235 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 PCP4P48539 62 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 SHHQ15465 462 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 DPPA3Q6W0C5 159 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 OR51B6Q9H340 312 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 NAGKQ9UJ70 344 aa14.21□□□□□ -0.13
PKP4-204ENST00000421462 TRAV1-1A0A0B4J248 108 aa14.21□□□□□ -0.14
PKP4-204ENST00000421462 KBTBD11O94819 623 aa14.21□□□□□ -0.14
PKP4-204ENST00000421462 CCR5P51681 352 aa14.21□□□□□ -0.14
PKP4-204ENST00000421462 TMEM41BQ5BJD5 291 aa14.21□□□□□ -0.14
PKP4-204ENST00000421462 CYP2G1PQ6ZSU1 146 aa14.21□□□□□ -0.14
PKP4-204ENST00000421462 OR6C1Q96RD1 312 aa14.21□□□□□ -0.14
PKP4-204ENST00000421462 PATZ1Q9HBE1 687 aaKnown RBP14.21□□□□□ -0.14
PKP4-204ENST00000421462 TRAPPC1Q9Y5R8 145 aa14.21□□□□□ -0.14
PKP4-204ENST00000421462 WDR1O75083 606 aa14.2□□□□□ -0.14
PKP4-204ENST00000421462 ABLIM2Q6H8Q1 611 aa14.2□□□□□ -0.14
PKP4-204ENST00000421462 C20orf204Q6ZNR8 217 aa14.2□□□□□ -0.14
PKP4-204ENST00000421462 TMEM204Q9BSN7 226 aa14.2□□□□□ -0.14
PKP4-204ENST00000421462 EXPH5Q8NEV8 1989 aa14.2□□□□□ -0.14
PKP4-204ENST00000421462 SYNGR3O43761 229 aa14.2□□□□□ -0.14
PKP4-204ENST00000421462 IRF2P14316 349 aa14.2□□□□□ -0.14
PKP4-204ENST00000421462 GCH1P30793 250 aa14.2□□□□□ -0.14
PKP4-204ENST00000421462 NTF4P34130 210 aa14.2□□□□□ -0.14
PKP4-204ENST00000421462 CEACAM6P40199 344 aa14.2□□□□□ -0.14
PKP4-204ENST00000421462 OR3A1P47881 315 aa14.2□□□□□ -0.14
PKP4-204ENST00000421462 PSG4Q00888 419 aa14.2□□□□□ -0.14
PKP4-204ENST00000421462 HYAL1Q12794 435 aa14.2□□□□□ -0.14
PKP4-204ENST00000421462 SPINK9Q5DT21 86 aa14.2□□□□□ -0.14
PKP4-204ENST00000421462 DMRTA1Q5VZB9 504 aa14.2□□□□□ -0.14
PKP4-204ENST00000421462 SPACA9Q96E40 222 aaPredicted RBP14.2□□□□□ -0.14
PKP4-204ENST00000421462 ZXDAP98168 799 aa14.19□□□□□ -0.14
PKP4-204ENST00000421462 DAZAP2Q15038 168 aaPredicted RBP14.19□□□□□ -0.14
PKP4-204ENST00000421462 SLC23A3Q6PIS1 610 aa14.19□□□□□ -0.14
PKP4-204ENST00000421462 MBD3L1Q8WWY6 194 aa14.19□□□□□ -0.14
PKP4-204ENST00000421462 HLA-CQ95604 372 aa14.19□□□□□ -0.14
PKP4-204ENST00000421462 C10orf35Q96D05 121 aa14.19□□□□□ -0.14
PKP4-204ENST00000421462 RAB40CQ96S21 281 aa14.19□□□□□ -0.14
PKP4-204ENST00000421462 PARD6AQ9NPB6 346 aa14.19□□□□□ -0.14
PKP4-204ENST00000421462 CRIM1Q9NZV1 1036 aa14.19□□□□□ -0.14
PKP4-204ENST00000421462 TRAPPC6AO75865 159 aa14.19□□□□□ -0.14
PKP4-204ENST00000421462 CRYGSP22914 178 aa14.19□□□□□ -0.14
PKP4-204ENST00000421462 HBG1P69891 147 aa14.19□□□□□ -0.14
PKP4-204ENST00000421462 HBG2P69892 147 aa14.19□□□□□ -0.14
PKP4-204ENST00000421462 RAB35Q15286 201 aa14.19□□□□□ -0.14
PKP4-204ENST00000421462 C10orf128Q5T292 105 aa14.19□□□□□ -0.14
PKP4-204ENST00000421462 ACY3Q96HD9 319 aa14.19□□□□□ -0.14
PKP4-204ENST00000421462 P2RX4Q99571 388 aa14.19□□□□□ -0.14
PKP4-204ENST00000421462 OR6C3Q9NZP0 311 aa14.19□□□□□ -0.14
PKP4-204ENST00000421462 MARCH11A6NNE9 402 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 TUSC2O75896 110 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 HPRT1P00492 218 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 SFTPCP11686 197 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 S100GP29377 79 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 FAM27BQ5VT28 67 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 OR56B2PQ8NGI1 322 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 OR5D13Q8NGL4 314 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 DNASE2BQ8WZ79 361 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 OR1A1Q9P1Q5 309 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 COL6A3P12111 3177 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 A0A0J9YW62 118 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 LMO7DNF2Z398 122 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 GDF9O60383 454 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 SLC38A11Q08AI6 406 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 SLC25A53Q5H9E4 307 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 ACSM6Q6P461 480 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 GBGT1Q8N5D6 347 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 ZIC4Q8N9L1 334 aa14.18□□□□□ -0.14
PKP4-204ENST00000421462 TMEM54Q969K7 222 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms