RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDNF-208	ENST00000418212	FAHD2A	Q96GK7	314 aa		11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	MAP1LC3B	Q9GZQ8	125 aa		11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	CTDSP1	Q9GZU7	261 aa		11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	GAL3ST2	Q9H3Q3	398 aa		11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	OR2W1	Q9Y3N9	320 aa		11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	RALGAPA2	Q2PPJ7	1873 aa		11.45	□□□□□ -0.58
BDNF-208	ENST00000418212		K7EQM0	130 aa		11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	CYTIP	O60759	359 aa		11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	SNRPC	P09234	159 aa	Known RBP	11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	DYNLT3	P51808	116 aa		11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	ZNF260	Q3ZCT1	412 aa		11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	OR5B3	Q8NH48	314 aa		11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	ISOC2	Q96AB3	205 aa		11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	CYC1	P08574	325 aa		11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	G6PC	P35575	357 aa		11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	DBX2	Q6ZNG2	339 aa		11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	RAB1C	Q92928	201 aa		11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	ABHD14B	Q96IU4	210 aa		11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	TMEM56	Q96MV1	263 aa		11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	RCC2	Q9P258	522 aa	Known RBP	11.45	□□□□□ -0.58
BDNF-208	ENST00000418212	PQLC2L	A1A4F0	135 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	RIPPLY2	Q5TAB7	128 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	SSMEM1	Q8WWF3	244 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	R3HDM4	Q96D70	268 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	TIMP4	Q99727	224 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	CHRNA10	Q9GZZ6	450 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	TMPRSS5	Q9H3S3	457 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	G6PC2	Q9NQR9	355 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	OTOGL	Q3ZCN5	2332 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	IFI6	P09912	130 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	PSG2	P11465	335 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	FST	P19883	344 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	CSN1S1	P47710	185 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	SUCLG1	P53597	346 aa	Known RBP	11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	RPL31	P62899	125 aa	Known RBP	11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	HLA-DRB3	P79483	266 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	GAMT	Q14353	236 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	IL13RA2	Q14627	380 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	UQCC3	Q6UW78	93 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	MS4A5	Q9H3V2	200 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	CLDN14	O95500	239 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	CEACAM21	Q3KPI0	293 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	OR10D4P	Q8NGN7	298 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	RGP1	Q92546	391 aa	Predicted RBP	11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	OR2V2	Q96R30	315 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	CCL13	Q99616	98 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	RNF122	Q9H9V4	155 aa		11.44	□□□□□ -0.58
BDNF-208	ENST00000418212	TRBV5-7	A0A0A0MS05	114 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	OOEP	A6NGQ2	149 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	NUDT19	A8MXV4	375 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	ACAA1	P09110	424 aa	Predicted RBP	11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	S100A7	P31151	101 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	RAB7A	P51149	207 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	ZP1	P60852	638 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	IGFBP7	Q16270	282 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	TEX30	Q5JUR7	227 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	RHOV	Q96L33	236 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	BARX1	Q9HBU1	254 aa	Predicted RBP	11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	ZNF320	A2RRD8	509 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	TMEM229A	B2RXF0	380 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	RPL36A-HNRNPH2	H7BZ11	118 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	PHOX2A	O14813	284 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	DAO	P14920	347 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	C1orf100	Q5SVJ3	147 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	SMIM15	Q7Z3B0	74 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	ZNF429	Q86V71	674 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	ZDHHC16	Q969W1	377 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	NTNG2	Q96CW9	530 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	ABHD14A	Q9BUJ0	271 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	ZNF426	Q9BUY5	554 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	RAB1B	Q9H0U4	201 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	GAR1	Q9NY12	217 aa	Known RBP	11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	FANCM	Q8IYD8	2048 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	MPTX1	A8MV57	137 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	PRR33	A8MZF0	331 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	ORM2	P19652	201 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	PRDX2	P32119	198 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	C1QL2	Q7Z5L3	287 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	FAM24B	Q8N5W8	94 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	OR4S2	Q8NH73	311 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	ITLN1	Q8WWA0	313 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	WNT5B	Q9H1J7	359 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	OR51I2	Q9H344	312 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212	TNFRSF19	Q9NS68	423 aa		11.43	□□□□□ -0.58
BDNF-208	ENST00000418212		A0A1W2PNV4	684 aa		11.42	□□□□□ -0.58
BDNF-208	ENST00000418212	ZIC3	O60481	467 aa		11.42	□□□□□ -0.58
BDNF-208	ENST00000418212	ISG15	P05161	165 aa		11.42	□□□□□ -0.58
BDNF-208	ENST00000418212	BPIFB3	P59826	476 aa		11.42	□□□□□ -0.58
BDNF-208	ENST00000418212	NHLH2	Q02577	135 aa		11.42	□□□□□ -0.58
BDNF-208	ENST00000418212	UNQ9370/PRO34162	Q6UXP9	181 aa		11.42	□□□□□ -0.58
BDNF-208	ENST00000418212	HSD17B10	Q99714	261 aa	Known RBP	11.42	□□□□□ -0.58
BDNF-208	ENST00000418212	KLHDC3	Q9BQ90	382 aa		11.42	□□□□□ -0.58
BDNF-208	ENST00000418212	CD1A	P06126	327 aa		11.42	□□□□□ -0.58
BDNF-208	ENST00000418212	UMOD	P07911	640 aa		11.42	□□□□□ -0.58
BDNF-208	ENST00000418212	F2R	P25116	425 aa		11.42	□□□□□ -0.58
BDNF-208	ENST00000418212	IZUMO4	Q1ZYL8	232 aa		11.42	□□□□□ -0.58
BDNF-208	ENST00000418212	IMMP1L	Q96LU5	166 aa		11.42	□□□□□ -0.58
BDNF-208	ENST00000418212	LIPG	Q9Y5X9	500 aa		11.42	□□□□□ -0.58
BDNF-208	ENST00000418212	HEATR5A	Q86XA9	2040 aa		11.42	□□□□□ -0.58
BDNF-208	ENST00000418212	FAM3A	P98173	230 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms