RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 GPX8Q8TED1 209 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 EDARADDQ8WWZ3 215 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 TSC22D3Q99576 134 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 SMR3AQ99954 134 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 BEX2Q9BXY8 128 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 TMPRSS13Q9BYE2 586 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 MS4A7Q9GZW8 240 aaPredicted RBP6.94□□□□□ -1.3
TRIM48-201ENST00000417545 GFOD1Q9NXC2 390 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 V9GYH0 126 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 CCDC168Q8NDH2 2452 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 AKAP9Q99996 3911 aa6.94□□□□□ -1.3
TRIM48-201ENST00000417545 FLNBO75369 2602 aaKnown RBP6.94□□□□□ -1.3
TRIM48-201ENST00000417545 IGHV2-26A0A0B4J1V2 119 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 C15orf65H3BRN8 121 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 F2RL2O00254 374 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 PMP2P02689 132 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 HOXB4P17483 251 aaPredicted RBP6.93□□□□□ -1.3
TRIM48-201ENST00000417545 PPP1CCP36873 323 aaKnown RBP6.93□□□□□ -1.3
TRIM48-201ENST00000417545 GDNFP39905 211 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 CEACAM3P40198 252 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 CEACAM6P40199 344 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 ETV6P41212 452 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 ARHGDIBP52566 201 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 DLX1P56177 255 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 DLX6P56179 175 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 PRR20EP86478 221 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 PRR20CP86479 221 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 PRR20DP86480 221 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 PRR20BP86481 221 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 PRR20AP86496 221 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 PRB3Q04118 309 aaPredicted RBP6.93□□□□□ -1.3
TRIM48-201ENST00000417545 FAM120AOSQ5T036 256 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 IL17RELQ6ZVW7 336 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 Q71RC1 249 aaPredicted RBP6.93□□□□□ -1.3
TRIM48-201ENST00000417545 TOMM5Q8N4H5 51 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 Q8N7P7 452 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 OR5AP2Q8NGF4 316 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 OR52M1Q8NGK5 317 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 OR9G1Q8NH87 305 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 LEAP2Q969E1 77 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 UPRTQ96BW1 309 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 TBX15Q96SF7 602 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 THAP7Q9BT49 309 aaPredicted RBP6.93□□□□□ -1.3
TRIM48-201ENST00000417545 MCUBQ9NWR8 336 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 KLK11Q9UBX7 282 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 MTFP1Q9UDX5 166 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 FAM96BQ9Y3D0 163 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 ABCA2Q9BZC7 2435 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 IGHV1-69DA0A0B4J2H0 117 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 CENPXA8MT69 81 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 DISC1C4P0D8 188 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 NPIPB11E5RHQ5 1161 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 J3QRK9 145 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 NPFFO15130 113 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 GSTZ1O43708 216 aaPredicted RBP6.93□□□□□ -1.3
TRIM48-201ENST00000417545 MMP23AO75900 390 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 RAB3DO95716 219 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 IGHV1-69P01742 117 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 AKAIN1P0CW23 69 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 OR5H8P0DN80 308 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 MMP9P14780 707 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 TBPP20226 339 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 EPHA1P21709 976 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 HRH1P35367 487 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 RAB7AP51149 207 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 UBE2E1P51965 193 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 GNMTQ14749 295 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 MEF2DQ14814 521 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 IGSF11Q5DX21 431 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 STEAP1BQ6NZ63 245 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 Q6ZS49 121 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 TMEM229BQ8NBD8 167 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 DACT3Q96B18 629 aaPredicted RBP6.93□□□□□ -1.3
TRIM48-201ENST00000417545 CREB3L1Q96BA8 519 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 CABLES2Q9BTV7 478 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 ABHD14AQ9BUJ0 271 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 SRRQ9GZT4 340 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 RDH8Q9NYR8 311 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 OR1A1Q9P1Q5 309 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 ZNF221Q9UK13 617 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 CDC42EP3Q9UKI2 254 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 NUP50Q9UKX7 468 aa6.93□□□□□ -1.3
TRIM48-201ENST00000417545 MYO9AB2RTY4 2548 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 IGKV1D-8A0A087WSZ0 117 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 LINC00854A0A1B0GVQ3 168 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 A0A1W2PPE3 182 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 RNASEK-C17orf49H0YIS7 233 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 J3QR06 171 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 M0QYG6 137 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 YPEL1O60688 119 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 CD3DP04234 171 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 AMY2AP04746 511 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 CGB3P0DN86 165 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 CGB7P0DN87 165 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 SRD5A1P18405 259 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 NFYAP23511 347 aaPredicted RBP6.92□□□□□ -1.3
TRIM48-201ENST00000417545 HTR1DP28221 377 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 S100GP29377 79 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 FCGR2CP31995 323 aa6.92□□□□□ -1.3
TRIM48-201ENST00000417545 GPR12P47775 334 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms