RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 TRGC1P0CF51 173 aa15.3■□□□□ 0.04
SCARB1-203ENST00000415380 PNRC1Q12796 327 aaPredicted RBP15.3■□□□□ 0.04
SCARB1-203ENST00000415380 C1orf87Q8N0U7 546 aa15.3■□□□□ 0.04
SCARB1-203ENST00000415380 FAM58AQ8N1B3 248 aa15.3■□□□□ 0.04
SCARB1-203ENST00000415380 CA5BP1Q8WTZ4 195 aa15.3■□□□□ 0.04
SCARB1-203ENST00000415380 FRZBQ92765 325 aa15.3■□□□□ 0.04
SCARB1-203ENST00000415380 LSM10Q969L4 123 aaKnown RBP15.3■□□□□ 0.04
SCARB1-203ENST00000415380 POM121L2Q96KW2 1035 aa15.3■□□□□ 0.04
SCARB1-203ENST00000415380 OR14J1Q9UGF5 321 aa15.3■□□□□ 0.04
SCARB1-203ENST00000415380 PIGBOS1A0A0B4J2F0 54 aa15.29■□□□□ 0.04
SCARB1-203ENST00000415380 GATCO43716 136 aaKnown RBP15.29■□□□□ 0.04
SCARB1-203ENST00000415380 CYB5R3P00387 301 aaPredicted RBP15.29■□□□□ 0.04
SCARB1-203ENST00000415380 LHX2P50458 406 aa15.29■□□□□ 0.04
SCARB1-203ENST00000415380 RND2P52198 227 aa15.29■□□□□ 0.04
SCARB1-203ENST00000415380 OR2T2Q6IF00 324 aa15.29■□□□□ 0.04
SCARB1-203ENST00000415380 PFDN5Q99471 154 aa15.29■□□□□ 0.04
SCARB1-203ENST00000415380 PCSK5Q92824 1860 aa15.29■□□□□ 0.04
SCARB1-203ENST00000415380 TRAV39A0A0B4J263 110 aa15.29■□□□□ 0.04
SCARB1-203ENST00000415380 CLDN34H7C241 214 aa15.29■□□□□ 0.04
SCARB1-203ENST00000415380 WNT2P09544 360 aa15.29■□□□□ 0.04
SCARB1-203ENST00000415380 RCC1LQ96I51 464 aaKnown RBP15.29■□□□□ 0.04
SCARB1-203ENST00000415380 PSMG3Q9BT73 122 aaPredicted RBP15.29■□□□□ 0.04
SCARB1-203ENST00000415380 TMEM242Q9NWH2 141 aa15.29■□□□□ 0.04
SCARB1-203ENST00000415380 BOKQ9UMX3 212 aaPredicted RBP15.29■□□□□ 0.04
SCARB1-203ENST00000415380 PPP1R3CQ9UQK1 317 aa15.29■□□□□ 0.04
SCARB1-203ENST00000415380 FRYLO94915 3013 aa15.29■□□□□ 0.04
SCARB1-203ENST00000415380 FREM1Q5H8C1 2179 aa15.29■□□□□ 0.04
SCARB1-203ENST00000415380 DEGS1O15121 323 aa15.28■□□□□ 0.04
SCARB1-203ENST00000415380 DUSP3P51452 185 aaPredicted RBP15.28■□□□□ 0.04
SCARB1-203ENST00000415380 IGFBP7Q16270 282 aa15.28■□□□□ 0.04
SCARB1-203ENST00000415380 LRRC75BQ2VPJ9 315 aa15.28■□□□□ 0.04
SCARB1-203ENST00000415380 ZNF573Q86YE8 665 aa15.28■□□□□ 0.04
SCARB1-203ENST00000415380 OPA3Q9H6K4 179 aa15.28■□□□□ 0.04
SCARB1-203ENST00000415380 SDF2L1Q9HCN8 221 aa15.28■□□□□ 0.04
SCARB1-203ENST00000415380 LRFN1Q9P244 771 aa15.28■□□□□ 0.04
SCARB1-203ENST00000415380 ELOA3CA0A087WX78 387 aaPredicted RBP15.28■□□□□ 0.04
SCARB1-203ENST00000415380 ANKRD30BLA7E2S9 258 aa15.28■□□□□ 0.04
SCARB1-203ENST00000415380 RHBDL1O75783 438 aa15.28■□□□□ 0.04
SCARB1-203ENST00000415380 SERPINA7P05543 415 aa15.28■□□□□ 0.04
SCARB1-203ENST00000415380 CLDN18P56856 261 aa15.28■□□□□ 0.04
SCARB1-203ENST00000415380 TESK1Q15569 626 aa15.28■□□□□ 0.04
SCARB1-203ENST00000415380 RYDENQ9NUL5 291 aaKnown RBP15.28■□□□□ 0.04
SCARB1-203ENST00000415380 RNF150Q9ULK6 438 aa15.28■□□□□ 0.04
SCARB1-203ENST00000415380 VPS13AQ96RL7 3174 aa15.28■□□□□ 0.04
SCARB1-203ENST00000415380 MDH2P40926 338 aaKnown RBP15.27■□□□□ 0.04
SCARB1-203ENST00000415380 GNG3P63215 75 aa15.27■□□□□ 0.04
SCARB1-203ENST00000415380 PRR18Q8N4B5 295 aa15.27■□□□□ 0.04
SCARB1-203ENST00000415380 MAFAQ8NHW3 353 aaPredicted RBP15.27■□□□□ 0.04
SCARB1-203ENST00000415380 SSX3Q99909 188 aa15.27■□□□□ 0.04
SCARB1-203ENST00000415380 OR51B6Q9H340 312 aa15.27■□□□□ 0.04
SCARB1-203ENST00000415380 ZNF407Q9C0G0 2248 aa15.27■□□□□ 0.03
SCARB1-203ENST00000415380 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.27■□□□□ 0.03
SCARB1-203ENST00000415380 LILRB2Q8N423 598 aa15.27■□□□□ 0.03
SCARB1-203ENST00000415380 CT55Q8WUE5 264 aa15.27■□□□□ 0.03
SCARB1-203ENST00000415380 LRP5LA4QPB2 252 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 OR5B21A6NL26 309 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 CEBPZOSA8MTT3 80 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 NPIPB11E5RHQ5 1161 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 ZNF16P17020 682 aaPredicted RBP15.26■□□□□ 0.03
SCARB1-203ENST00000415380 ARR3P36575 388 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 ZNF585BQ52M93 769 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 C4orf17Q53FE4 359 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 FAM180AQ6UWF9 173 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 P2RX4Q99571 388 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 ZNF703Q9H7S9 590 aaPredicted RBP15.26■□□□□ 0.03
SCARB1-203ENST00000415380 VAX2Q9UIW0 290 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 MPC1Q9Y5U8 109 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 DMDP11532 3685 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 WNT5AP41221 380 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 HBG1P69891 147 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 HBG2P69892 147 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 SERF2P84101 59 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 SSPNQ14714 243 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 TMEM41BQ5BJD5 291 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 Q6P435 159 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 TIPARPQ7Z3E1 657 aaKnown RBP15.26■□□□□ 0.03
SCARB1-203ENST00000415380 OR2M7Q8NG81 312 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 OR1K1Q8NGR3 316 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 UBALD1Q8TB05 177 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 PRDM13Q9H4Q3 707 aa15.26■□□□□ 0.03
SCARB1-203ENST00000415380 SYNGR4O95473 234 aa15.25■□□□□ 0.03
SCARB1-203ENST00000415380 PTBP3O95758 552 aaKnown RBP15.25■□□□□ 0.03
SCARB1-203ENST00000415380 MRGPRGQ86SM5 289 aa15.25■□□□□ 0.03
SCARB1-203ENST00000415380 OR4C12Q96R67 309 aa15.25■□□□□ 0.03
SCARB1-203ENST00000415380 WDR61Q9GZS3 305 aaKnown RBP15.25■□□□□ 0.03
SCARB1-203ENST00000415380 KCNS2Q9ULS6 477 aa15.25■□□□□ 0.03
SCARB1-203ENST00000415380 MAP1LC3B2A6NCE7 125 aa15.25■□□□□ 0.03
SCARB1-203ENST00000415380 OR5H1A6NKK0 313 aa15.25■□□□□ 0.03
SCARB1-203ENST00000415380 PHOX2AO14813 284 aa15.25■□□□□ 0.03
SCARB1-203ENST00000415380 CA6P23280 308 aa15.25■□□□□ 0.03
SCARB1-203ENST00000415380 ELLP55199 621 aaPredicted RBP15.25■□□□□ 0.03
SCARB1-203ENST00000415380 PLP2Q04941 152 aa15.25■□□□□ 0.03
SCARB1-203ENST00000415380 ACSF3Q4G176 576 aaPredicted RBP15.25■□□□□ 0.03
SCARB1-203ENST00000415380 SPANXN5Q5MJ07 72 aa15.25■□□□□ 0.03
SCARB1-203ENST00000415380 DCAF12Q5T6F0 453 aa15.25■□□□□ 0.03
SCARB1-203ENST00000415380 APH1AQ96BI3 265 aa15.25■□□□□ 0.03
SCARB1-203ENST00000415380 THOC3Q96J01 351 aaKnown RBP15.25■□□□□ 0.03
SCARB1-203ENST00000415380 HES7Q9BYE0 225 aa15.25■□□□□ 0.03
SCARB1-203ENST00000415380 MAP1LC3BQ9GZQ8 125 aa15.25■□□□□ 0.03
SCARB1-203ENST00000415380 OR51I2Q9H344 312 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms