RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 GABRA6Q16445 453 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 RPEL1Q2QD12 228 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 GCSAMLQ5JQS6 135 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 CLEC12AQ5QGZ9 265 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF684Q5T5D7 378 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 SDHAF4Q5VUM1 108 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR4A47Q6IF82 309 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 STEAP1BQ6NZ63 245 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 SLC48A1Q6P1K1 146 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 DPY19L2P2Q6ZN68 376 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 FRRS1Q6ZNA5 592 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 Q7L0L9 218 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 ASCL5Q7RTU5 278 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR2W3Q7Z3T1 314 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 SH2D6Q7Z4S9 175 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 C5orf24Q7Z6I8 188 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 DPPA2Q7Z7J5 298 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 SLC25A42Q86VD7 318 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 NRMQ8IXM6 262 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 C9orf40Q8IXQ3 194 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 MMD2Q8IY49 270 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 RNF175Q8N4F7 328 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 Q8NBF4 154 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 MDS2Q8NDY4 140 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF738Q8NE65 137 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 NOXO1Q8NFA2 376 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR10A7Q8NGE5 316 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR4C16Q8NGL9 310 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR9A4Q8NGU2 314 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR13D1Q8NGV5 346 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR5K2Q8NHB8 316 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 LYPD6BQ8NI32 183 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 ASB17Q8WXJ9 295 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 RAB8BQ92930 207 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 APH1AQ96BI3 265 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 BPIFA2Q96DR5 249 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 TIMD4Q96H15 378 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 FAM210BQ96KR6 192 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 C4orf45Q96LM5 186 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 JSRP1Q96MG2 331 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 WFIKKN1Q96NZ8 548 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 MS4A4EQ96PG1 132 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 SCGB3A2Q96PL1 93 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 AQP10Q96PS8 301 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR7D2Q96RA2 312 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 S100A13Q99584 98 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 PHB2Q99623 299 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 CCDC3Q9BQI4 270 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 PRSS27Q9BQR3 290 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 COMMD4Q9H0A8 199 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 TMEM27Q9HBJ8 222 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 PARP11Q9NR21 331 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 STARD5Q9NSY2 213 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 UQCC1Q9NVA1 299 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 KLK11Q9UBX7 282 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 NPIPA1Q9UND3 350 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 PSG11Q9UQ72 335 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF443Q9Y2A4 671 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF780BQ9Y6R6 833 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 V9GYY9 64 aa2.96□□□□□ -1.94
HMGB3P23-201ENST00000414981 PLXNA2O75051 1894 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 NUP210Q8TEM1 1887 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 A0A1W2PRD5 423 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 LRIT2A6NDA9 550 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 SLC22A20A6NK97 555 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 SHISA7A6NL88 538 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 CPSF4LA6NMK7 179 aaKnown RBP2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 EFCAB7A8K855 629 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 C9J4A7 227 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 E5RGE8 158 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 G3V3Y1 287 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 H0Y980 276 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 H3BTX0 84 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 SULT2B1O00204 365 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 SLC17A2O00624 439 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 SIGLEC5O15389 551 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 PIN1P1O15428 100 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 SLC31A2O15432 143 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 NUPL2O15504 423 aaKnown RBP2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 EIF3GO75821 320 aaKnown RBP eCLIP2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 LYPD3O95274 346 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 MPZL1O95297 269 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 UTS2O95399 124 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 OXTP01178 125 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 IFNA17P01571 189 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 HLA-HP01893 362 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 THY1P04216 161 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 CD5P06127 495 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 HOXC4P09017 264 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 GTF2F2P13984 249 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 CD59P13987 128 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 MYOGP15173 224 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 RPL35AP18077 110 aaKnown RBP2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 CSRP1P21291 193 aaKnown RBP2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZBTB25P24278 435 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 EDNRAP25101 427 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 CD34P28906 385 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 CEACAM6P40199 344 aa2.95□□□□□ -1.94
HMGB3P23-201ENST00000414981 SSR2P43308 183 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms